EY692188

Overview
NameEY692188
Unique NameEY692188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.711e-59
Identity = 110/113 (97.35%), Postives = 113/113 (100.00%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDESGPSIVHRKCF
Sbjct:  265 QPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.711e-59
Identity = 110/113 (97.35%), Postives = 113/113 (100.00%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDESGPSIVHRKCF
Sbjct:  245 QPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 357
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.764e-59
Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 8.764e-59
Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.952e-58
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  265 QPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.330e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.350e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.350e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKE+TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.350e-58
Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  265 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY692188 vs. ExPASy Swiss-Prot
Match: ACT_PINCO (Actin (Fragment) OS=Pinus contorta PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.681e-58
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 2 
Query:   11 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 349
            QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+ESGPSIVHRKCF
Sbjct:   49 QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYEESGPSIVHRKCF 161
The following BLAST results are available for this feature:
BLAST of EY692188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
ACT13_SOLTU6.711e-5997.35Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU6.711e-5997.35Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT3_ORYSJ8.764e-5998.23Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI8.764e-5998.23Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT7_ARATH1.952e-5898.23Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT11_ARATH3.330e-5896.46Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT_GOSHI4.350e-5896.46Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT3_SOLTU4.350e-5896.46Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT11_SOLTU4.350e-5896.46Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT_PINCO5.681e-5897.35Actin (Fragment) OS=Pinus contorta PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-H12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692188 ID=EY692188; Name=EY692188; organism=Citrus sinensis; type=EST; length=852bp
CCCGCGTCCGCAGCCATCTCTCATCGGAATGGAAGCTGCTGGTATTCATG
AGACTACCTACAACTCCATCATGAAGTGTGATGTGGATATTAGAAAGGAT
CTGTATGGTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCCCTGGTAT
TGCCGACCGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGCAGCATGA
AGATCAAGGTCGTGGCTCCACCAGAGAGAAAATACAGTGTTTGGATTGGA
GGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGATCTCAAA
GGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACAGGAAATGCTTCT
AAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTCCATTTAATTGGT
TTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACATGGAGAAGTGCT
AAGGATGGGGGCATTGAAGGAGGGATATCTCGATATTGATGTTATTATAC
AAGCTTTCTTACGCCGTTTGAGGGGGGCCTTATTTCTGTTCTCCAACCAT
CTTACTAGACTTGCATTTCATCGGGGGTTCAACCAAGTCTTTTTTTAATT
TTTTTTCCCTTTTTTTACGTTAAACAAAGAAAGTTTGTAACCTGGTCAAT
AAAAAGGAGGACCGCCAAGCGCTTGCCTCACTCTCACTACCCACGACCAC
ACGACTTGGACTGGAACCATACAACACCACCATCCTCAAACAGAGAGTCA
AAACGGAAAACAAATAAAGGGAAGACAAAAGGAATTCATACTAAAGTCTC
GCCGTTCACCGGCCAACCGCTCTAAAATATTATAAAAATTGCTGTATGAA
AA
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