EY692130

Overview
NameEY692130
Unique NameEY692130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.730e-81
Identity = 150/202 (74.26%), Postives = 165/202 (81.68%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EVRRRFYKNWC            +Y++D GKK IQ QLEK+KKYAS+VRV+AHTQIRKMKGLKQKKAHLMEIQ+NGGTIA+KVDY Y FFEK+IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE  ++  +  +    S   A      TEK +TPMG
Sbjct:  113 EVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQES-HAACTEFDRTEKDITPMG 313          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 298.901 bits (764), Expect = 2.498e-80
Identity = 148/202 (73.27%), Postives = 168/202 (83.17%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EVRRRFYKNW             QY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE  ++  +  +    + T A      TEK +TPMG
Sbjct:  113 EVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHT-AMTEYDRTEKDVTPMG 313          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 290.041 bits (741), Expect = 1.160e-77
Identity = 147/203 (72.41%), Postives = 163/203 (80.30%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLT-LA*LNLTGTEKGLTPMG 606
            E+RRRFYKNW             ++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKGLKQKKAHL EIQ+NGG IA+KVDYA   FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE  ++  +   G  G  T  A      TEK +TPMG
Sbjct:  113 ELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRV--GKVGQETHSAMTEYDRTEKDITPMG 313          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 9.219e-68
Identity = 105/168 (62.50%), Postives = 133/168 (79.17%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 504
            + R RFYKNW             +++ ++G+KSI+A L K+KKY S +RV+AHTQ++ MK  ++KKAH+MEIQ+NGGT+AEKVD+A    EKQ+PVD+VF +DEMID IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE
Sbjct:  113 DCRGRFYKNWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTE 279          

HSP 2 Score: 53.1434 bits (126), Expect = 9.219e-68
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 2
Query:  503 KMNKKVYKLGK----------GGTGVSHWLN*I*QGLRKDLPPWGGFPHYGIVKKDYLNVKGCLVGTIKKGGLRFFRSFL-QTKNF 727
            ++NKK+Y+LGK          GGT              K + P GGFPHYG+V +D++ ++GC VG+ KK  +   +S + QTK F
Sbjct:  279 EVNKKIYRLGKSCLTEEGKKNGGTDYDI--------TEKSVNPMGGFPHYGLVNQDFVMIRGCCVGS-KKRPITLRKSLIVQTKRF 355          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 2.195e-60
Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT 501
            E RRRFY NW             +++ ++GKK I+A   K+KKY S +RV+AHTQ++ ++  +QKKAHL+EIQ+NGGTI +KVD+A    EKQI VD VF +DEMID IGVTKG G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT
Sbjct:  113 EARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRR-RQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278          

HSP 2 Score: 40.817 bits (94), Expect = 2.195e-60
Identity = 20/61 (32.79%), Postives = 35/61 (57.38%), Query Frame = 2
Query:  506 MNKKVYKLGKGGTGVSHWLN*I*QG--LRKDLPPWGGFPHYGIVKKDYLNVKGCLVGTIKK 682
            +N K+Y++GK         N   +    +K + P GGFP YG+V +DY+ ++G ++G  K+
Sbjct:  280 INNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKR 340          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.861e-60
Identity = 99/167 (59.28%), Postives = 127/167 (76.05%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT 501
            E RRRFY NW             +++ ++GKK I+A   K+KKY S +RV+AHTQ++ ++  +QKKAHL+EIQVNGGTI +KVD+A    EKQ+ VD VF +DEMID IGVT+G G++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT
Sbjct:  113 EARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRR-RQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRT 278          

HSP 2 Score: 41.9726 bits (97), Expect = 2.861e-60
Identity = 21/61 (34.43%), Postives = 35/61 (57.38%), Query Frame = 2
Query:  506 MNKKVYKLGKGGTGVSHWLN*I*QG--LRKDLPPWGGFPHYGIVKKDYLNVKGCLVGTIKK 682
            +N K+Y++GK         N   +    +K + P GGFP YGIV +DY+ ++G ++G  K+
Sbjct:  280 INNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 4.146e-59
Identity = 114/207 (55.07%), Postives = 148/207 (71.50%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW---DGSL--TLA*LNLTGTEKGLTPMG 606
            E +RRFYKNW             +++ D GKK ++     +KKY  V+R++AHTQ+R +  L+QKKAHLMEIQVNGGT+AEK+D+A    E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE  ++  +  QG+   DG L    A  +   ++K + P+G
Sbjct:  113 ECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 226.868 bits (577), Expect = 1.206e-58
Identity = 113/207 (54.59%), Postives = 148/207 (71.50%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW---DGSL--TLA*LNLTGTEKGLTPMG 606
            E +RRFYKNW             +++ D GKK ++     +KKY  V+R++AHTQ+R +  L+QKKAHLMEIQVNGGT+AEK+D+A    E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE  ++  +  QG+   DG L    A  +   ++K + P+G
Sbjct:  113 ECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.206e-58
Identity = 113/207 (54.59%), Postives = 149/207 (71.98%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGW---DGSL--TLA*LNLTGTEKGLTPMG 606
            E +RRFYKNW             +++ ++GKK ++     +KKY  V+RV+AHTQ+R +  L+QKKAHLMEIQVNGGT+AEK+D+A    E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE  ++  +  QG+   DG L    A  +   ++K + P+G
Sbjct:  113 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318          
BLAST of EY692130 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 2.058e-58
Identity = 114/202 (56.44%), Postives = 145/202 (71.78%), Query Frame = 1
Query:    1 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTENEQEGLQAWQGWDGSLTLA*LNLTGTEKGLTPMG 606
            EV+RRFYKNW             ++  + G  SI  +LE+IKKY +VVRVLAHTQIRK   LKQKKAHLMEIQVNGG++A+KVD+A   FEK I +D++F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT    +  +  +G D        ++  ++K +TPMG
Sbjct:  113 EVKRRFYKNWYKSKKKAFTKYAKKHAEENGA-SITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDI--SKKQITPMG 310          
The following BLAST results are available for this feature:
BLAST of EY692130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
RL3_ORYSJ1.730e-8174.2660S ribosomal protein L3 OS=Oryza sativa subsp. ja... [more]
RL31_ARATH2.498e-8073.2760S ribosomal protein L3-1 OS=Arabidopsis thaliana... [more]
RL32_ARATH1.160e-7772.4160S ribosomal protein L3-2 OS=Arabidopsis thaliana... [more]
RL3_TOXCA9.219e-6862.5060S ribosomal protein L3 OS=Toxocara canis GN=RPL3... [more]
RL3_CAEBR2.195e-6059.8860S ribosomal protein L3 OS=Caenorhabditis briggsa... [more]
RL3_CAEEL2.861e-6059.2860S ribosomal protein L3 OS=Caenorhabditis elegans... [more]
RL3_MOUSE4.146e-5955.0760S ribosomal protein L3 OS=Mus musculus GN=Rpl3 P... [more]
RL3_RAT1.206e-5854.5960S ribosomal protein L3 OS=Rattus norvegicus GN=R... [more]
RL3_HUMAN1.206e-5854.5960S ribosomal protein L3 OS=Homo sapiens GN=RPL3 P... [more]
RL3_ASPFU2.058e-5856.4460S ribosomal protein L3 OS=Aspergillus fumigatus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-097-B10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692130 ID=EY692130; Name=EY692130; organism=Citrus sinensis; type=EST; length=877bp
GAGGTGAGAAGAAGGTTCTACAAGAACTGGTGCAAATCCAAGAAGAAGGC
TTTCACAAAATACTCAAAGCAGTATGAAACAGATGAAGGGAAGAAAAGTA
TCCAAGCTCAGCTGGAGAAGATCAAGAAGTATGCATCTGTTGTTCGTGTT
CTTGCTCACACTCAGATTAGGAAAATGAAGGGTTTGAAGCAGAAGAAGGC
ACACCTGATGGAAATCCAGGTCAATGGTGGCACCATTGCTGAAAAAGTTG
ACTATGCATATGGCTTCTTTGAAAAGCAAATTCCTGTTGATGCTGTTTTC
CAGAAGGATGAGATGATTGACATCATCGGTGTCACGAAAGGTAAAGGTTA
TGAAGGTGTTGTCACCCGTTGGGGTGTTACCCGCCTTCCTCGCAAGACTC
ACAGAGGTCTGCGTAAGGTGGCTTGTATTGGTGCCTGGCATCCTGCTAGG
GTTTCCTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCATCATCGTAC
TGAAAATGAACAAGAAGGTTTACAAGCTTGGCAAGGGTGGGACGGGAGTC
TCACACTGGCTTAACTGAATTTGACAGGGACTGAGAAAGGACTTACCCCC
ATGGGGTGGCTTTCCTCACTATGGGATTGTGAAAAAAGATTATTTGAATG
TTAAGGGATGCTTGGTTGGGACCATAAAAAAGGGGGGTCTACGTTTCTTC
AGGTCGTTTCTCCAAACAAAAAATTTTCGTTTAAGTCTTTTGGAGGAATC
AAACATTTACGTTTACTTTGATTACCTCTTTCCAAGGTTTGGGGGAATGG
GCGCCTTTTTCAACATTACCATGGTAAGAAACAAAAAATTATATAGTGGA
CCGCATGGGAGAACCTAAAATTTGGGT
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