EY692114

Overview
NameEY692114
Unique NameEY692114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SUGT1_HUMAN (Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 4.725e-29
Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 3
Query:   24 HYIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            H IIP +  ++VLSTK+EI+L K E ++W  LE       P++          +  YPSS P   +WDKL  ++        L+GDAALN+ FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE + PD ME
Sbjct:  226 HPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQF-----VADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDME 361          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SUGT1_RAT (Suppressor of G2 allele of SKP1 homolog OS=Rattus norvegicus GN=Sugt1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.796e-28
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 3
Query:   24 HYIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            H IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE + PD ME
Sbjct:  197 HPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDME 332          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SUGT1_MOUSE (Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.345e-28
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 3
Query:   24 HYIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            H IIP +  ++VLSTK+EI++ K E ++W  LE       P++      +   +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE + PD ME
Sbjct:  197 HPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQF-----TADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDME 332          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SUGT1_BOVIN (Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.823e-28
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 3
Query:   24 HYIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            H IIP +  ++VLSTK+EI++ K E ++W  LE  +G V     N        +  YPSS     +WDKL  ++        L+GDAALNK FQ+IY+D  ++ +RAM KSF+ES GTVLSTNW +VG +KVE + PD ME
Sbjct:  199 HPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLE-GQGDVP----NPKPFIADVKNLYPSSSHYTRNWDKLVGEIKEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDME 334          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.631e-23
Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 3
Query:   63 STKVEIRLAKAEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            STKVEI++ K+  I+W +LEF+  +     ++  S S    P  PS   ++ DWDKL  +         L+GD ALNK F++I++   ED +RAM KSF ES GTVLSTNW EVGSKKV G  P G+E
Sbjct:  263 STKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSS----PAVPSPYASKKDWDKLPNE-----PEEKLEGDQALNKIFRDIFSKGSEDQQRAMMKSFTESGGTVLSTNWDEVGSKKVVGEPPKGLE 381          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: SGT1_YEAST (Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.932e-20
Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 3
Query:   18 ISHYIIPAKCRYEVLSTKVEIRLAKAEPIQWSSLEFS------------KGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            +SH + P     ++   K+EI L+K +  QW  LE              K +    R+ +   +   R +YPSS   ++DW KL+            D       FFQ++YA AD DT+RAM KSF+ESNGT LST+W++V    V+ S P+GME
Sbjct:  243 LSHEVDPKAVSLKIFPKKLEITLSKIDSTQWKKLEEDILTESSRLSDEGKNSDSATRLLSAETASKERLSYPSSSKKKIDWSKLDIDEEADEEAGSADS------FFQKLYAGADPDTKRAMMKSFIESNGTALSTDWEDVSKGTVKTSPPEGME 391          
BLAST of EY692114 vs. ExPASy Swiss-Prot
Match: GIT7_SCHPO (Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces pombe GN=git7 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.200e-18
Identity = 57/140 (40.71%), Postives = 74/140 (52.86%), Query Frame = 3
Query:   30 IIPAKCRYEVLSTKVEIRLAK-AEPIQWSSLEFSKGAVVPQRVNTPSVSGSPRPTYPSSKPTRVDWDKLEAQVXXXXXXXXLDGDAALNKFFQEIYADADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSTPDGME 446
            I+P K  +++ S+KVEI L K    I+W +L  S        VN  +   +      ++K    DWD L              G+AAL   FQ +Y +AD+DTRRAM KS+ ESNGT LSTNWK+V SK  E   P GME
Sbjct:  241 IVPEKSSFKLFSSKVEITLIKKVSEIKWEALVKSPAN---NSVNVYAKDSNHSSASGNTKNKAKDWDSLAKLADLEEDEPT--GEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVKSKTFETKPPQGME 375          
The following BLAST results are available for this feature:
BLAST of EY692114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SUGT1_HUMAN4.725e-2945.39Suppressor of G2 allele of SKP1 homolog OS=Homo sa... [more]
SUGT1_RAT1.796e-2844.68Suppressor of G2 allele of SKP1 homolog OS=Rattus ... [more]
SUGT1_MOUSE2.345e-2844.68Suppressor of G2 allele of SKP1 homolog OS=Mus mus... [more]
SUGT1_BOVIN6.823e-2846.10Suppressor of G2 allele of SKP1 homolog OS=Bos tau... [more]
SUGT1_DICDI8.631e-2346.88Protein SUGT1 homolog OS=Dictyostelium discoideum ... [more]
SGT1_YEAST8.932e-2035.48Protein SGT1 OS=Saccharomyces cerevisiae GN=SGT1 P... [more]
GIT7_SCHPO2.200e-1840.71Glucose-insensitive transcription protein 7 OS=Sch... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-H11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692114 ID=EY692114; Name=EY692114; organism=Citrus sinensis; type=EST; length=908bp
CATTTTCAACCTCGCTTATTTCCCATTATATAATACCTGCCAAATGCAGA
TATGAAGTCCTCTCAACCAAAGTTGAAATCCGCCTTGCTAAAGCTGAACC
AATACAATGGTCGTCTCTTGAATTCAGCAAGGGAGCTGTAGTTCCTCAAA
GGGTTAATACACCATCCGTTTCTGGATCACCAAGACCCACCTACCCTTCC
TCAAAACCGACAAGAGTAGATTGGGACAAGCTTGAAGCTCAAGTGAAGAA
GGAGGAAAAAGAAGAAAAGCTAGATGGTGATGCAGCATTGAACAAATTTT
TCCAGGAGATTTATGCTGATGCAGATGAGGACACAAGACGAGCCATGAAA
AAGTCTTTCGTCGAGTCAAACGGGACGGTGCTCTCCACAAATTGGAAAGA
AGTTGGTTCAAAGAAGGTGGAAGGAAGTACACCTGATGGCATGGAAAATG
AAGAAATGGGAATACTAAACTCTTCTTTCTCTCCTTTTATTGGAGAAATT
GTAATTAAAACTTTTTTGGAGTTTTGGTCTCTGAAACTTTTTCATTTTCA
TCTCCTTCTTCAGGATCTAAAATAATCTTTTGGTGCTCGTTTGTGCTTGA
ATGGACTAAAGCTTTAAGTGGCTTAAATAACATTCCCCTTTTCAGTCCCC
GAAAAGTTCAAGGGGCTATTAATTGGGGGCTCAAACTTGGGCCTGAATTT
TTCCTTGGTGAAAAATTCCTAACCTAATTGAAATTGCTTTTCTTAGGGTT
CAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCCCTTCAAAAAGAAACCAAT
TTTAAATAAACCCGGGCAGGGTCAACCACAAAAACCCTCTCAAAAAAAGG
ACACCAAATTTATAAATTTCTGGGGGCCGGCCAATTTTAAAAAAAAAAAG
ATAAAAAG
back to top