EY692112

Overview
NameEY692112
Unique NameEY692112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692112 vs. ExPASy Swiss-Prot
Match: FBK69_ARATH (F-box/kelch-repeat protein At3g24760 OS=Arabidopsis thaliana GN=At3g24760 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.316e-36
Identity = 71/109 (65.14%), Postives = 88/109 (80.73%), Query Frame = 3 
Query:    3 FFLWKVDELSMEFSEIAIMPHDFLYSLVDTE-EDDKFASLKCVGLGNLIYVFNEEYHKKYPACVCEI-GTESDKCSWRRLPQLPLPVNEFHKVISFCSTVSLHNIIQRE 323
            F LW ++E SMEFSEIA+MP D L+ LVD++ EDDKF SLKC G GNL+YVFN++ HKK+PACVCEI G E+  CSWRR+P LP PVN+FHKV+SFCSTVS+ ++   E
Sbjct:  265 FNLWSIEEGSMEFSEIAVMPEDLLFGLVDSDDEDDKFRSLKCAGSGNLVYVFNDDCHKKFPACVCEIGGGENGICSWRRVPCLPSPVNKFHKVVSFCSTVSITDVFHPE 373
The following BLAST results are available for this feature:
BLAST of EY692112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBK69_ARATH4.316e-3665.14F-box/kelch-repeat protein At3g24760 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692112 ID=EY692112; Name=EY692112; organism=Citrus sinensis; type=EST; length=961bp
CCTTTTTTTTGTGGAAGGTTGATGAGCTTAGTATGGAGTTCAGTGAGATT
GCGATTATGCCGCATGATTTTTTGTACAGTTTGGTTGATACTGAGGAGGA
TGATAAATTCGCAAGCTTGAAATGTGTGGGGCTTGGTAATCTTATTTATG
TGTTCAATGAAGAGTATCATAAGAAGTATCCAGCTTGTGTTTGTGAGATT
GGGACTGAGTCTGATAAGTGTAGCTGGAGGAGGTTGCCGCAATTGCCATT
GCCAGTTAATGAGTTTCATAAAGTTATTAGCTTTTGTTCAACAGTTTCGC
TTCATAATATTATTCAGCGTGAGTAGGAAGGTAATGCTGCAGAACAAGTT
ATGTCACACTGATTAATTCCTACATCTTTGTATGAGTATAACTTGAATTC
CTTTCTTACTTGTGCATGATTTGTATCATTAGCATCTTAATTGGCACTCT
CTCCGTCACTGCAAGTAAATTTTGTAATACAATGTATGTATTTTGAATTA
CTATTTCTAGTGTATCTTTTGTATTGTTATCATGAATGAATTTAATCCCT
AAAGAATTACCTTTTCCNANNNNNAAGAAAAAATAGAAAGAGAGAGGAAA
GGAATAATTTATTTATAAAATGAAAGAGATGGCAAAAAAGAAAAAATAAG
AAGGAATACCTATAAATACAAACTATAATTAAAAGAAGCAAAAAACAGCC
AATAAAAATTTAATGGGGGCGGCCCCCCATAAAAGATAACAAAATTTTTA
TAACCCGGGGTGGCAGGAACTTATATTCTCTCTATATTTGGCCACACTAA
TATTATTTTTTCCGGGGGGGGCCGTTTTTATTCTACACACCGGCGGGGGG
GGAAAAAAAACACCGTGTGTGATTCCCCCCCTATTTCTGTTCCCCCTCGG
GTAAATCCACACCCCCCCCCTTCTTCTCCCCCGGGGGGGAGGGGAAGAAA
GAAAAGAAAAA
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