EY692095

Overview
NameEY692095
Unique NameEY692095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig820 contig Csv1_Contig820:689..1618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct:  117 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 154
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct:  170 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct:  170 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            K+IAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Sbjct:  160 KSIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 197
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  167 KTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  173 KTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  167 KTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  191 KTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12
Identity = 35/38 (92.11%), Postives = 38/38 (100.00%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KT+AECLADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  193 KTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
[Close]
BLAST of EY692095 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 1 
Query:   13 KTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 126
            KTIAECLADELINA KGSSNSYAIKKKDE+ERVAK+NR
Sbjct:  167 KTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
The following BLAST results are available for this feature:
BLAST of EY692095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
RS5_NICPL3.756e-13100.0040S ribosomal protein S5 (Fragment) OS=Nicotiana p... [more]
RS52_ARATH3.756e-13100.0040S ribosomal protein S5-2 OS=Arabidopsis thaliana... [more]
RS51_ARATH3.756e-13100.0040S ribosomal protein S5-1 OS=Arabidopsis thaliana... [more]
RS5_CICAR1.093e-1297.3740S ribosomal protein S5 (Fragment) OS=Cicer ariet... [more]
RS5_HUMAN1.427e-1294.7440S ribosomal protein S5 OS=Homo sapiens GN=RPS5 P... [more]
RS5_CAEEL1.427e-1294.7440S ribosomal protein S5 OS=Caenorhabditis elegans... [more]
RS5_BOVIN1.427e-1294.7440S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=... [more]
RS5A_DROME1.427e-1294.7440S ribosomal protein S5a OS=Drosophila melanogast... [more]
RS5B_DROME1.864e-1292.1140S ribosomal protein S5b OS=Drosophila melanogast... [more]
RS5_RAT5.423e-1292.1140S ribosomal protein S5 OS=Rattus norvegicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692095 ID=EY692095; Name=EY692095; organism=Citrus sinensis; type=EST; length=930bp
CCCACGCGTCCGAAGACTATTGCCGAATGCTTGGCCGATGAACTCATTAA
TGCTGCCAAGGGTTCATCTAACAGCTATGCGATCAAGAAGAAGGATGAGA
TTGAGAGAGTGGCAAAGGCCAATCGCTGAGGACGTGATAGTGGAGAAGCA
GATGCAGAAAGTTGTACTTTTAAAAAAAAAAAAAAACTTTTGGACGATGT
TTTGTTGCTATTTTATGAATGTTGTTTCAAGTTTTGAGTAGATGATATTG
AGGATGCATTTAGTGACTTACCGGTTCCGAAATAAAAAACATTAATTAAA
TAAAAAAGAAGAAATAGGAGGAAAAAAGAAAAGGTGCAAATGGCGGGAAT
ACAAAGACGGTAAGAACAGAGGGGGGGCCGCCCCAGAGGACCTAAGTTTT
CTTTTGCGGGGGGGGGAGGCTATAATTCTTTTTTCGGGGCACCGAGATTC
ATATTGCTGGCGGTCGTTTTTGAACGGCTGGGGGGGGGAAAAACCTGGGG
GTTACCCCAATTAATTCCCTTTGGGGATCATCCCCCTTTCTCCTGGTGGA
GTGATTACCGAAAGAGCCCCCACCATCTACCCTTTCCTACTATTGTGGCT
CGCGGGAAGGGGTATTTGGGGCGCGACCCTGTTAGCGCACCCATAAACTC
CGGGAAGAGGGGGGTGGAATTAACCCCAAGTATTGACACATCATCATGGA
GGGGGGACCCAATGAGGCCGGCACCTATATCGGTTTTTTTTTCCCTTTCT
TGTCTTTGAATGTTAAGGCGATGTATTTCACCGTGAAGATAATAAAATAT
GGGCGGCCCCATTTAAGGAGTGTCAAGAATATATGGAGTCTGATAGGGCC
CCCTTAATACACCACAAAAAAAAATGTAATATAATGGGGGGAATTTGATT
TACACATTAAAGTGTGGTGAACGACCTTCT
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