EY692081

Overview
NameEY692081
Unique NameEY692081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9204 contig Csv1_Contig9204:1..967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP4_ARATH (Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis thaliana GN=PPC4 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.076e-42
Identity = 87/112 (77.68%), Postives = 101/112 (90.18%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            IEMVL KAD  + K YDE LVSE R+ LG ELR+EL+TTEKYVLV+SGHEKL ++N+SL++LI+SRLPYLN MNMLQVEILKRLR+D+DN+KLRDALLITINGIAAGMRNTG
Sbjct:  921 IEMVLAKADIPMTKHYDEQLVSEKRRGLGTELRKELMTTEKYVLVISGHEKLLQDNKSLKKLIDSRLPYLNAMNMLQVEILKRLRRDEDNNKLRDALLITINGIAAGMRNTG 1032          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP2_CHLRE (Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas reinhardtii GN=Ppc2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.574e-28
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQE-LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            IEM+L K D  IA  Y+EVLV++  ++ LGAELR  L   +  +L V+GHE L  NN +L +LI  R P+++P+N+LQVE+L+RLRQD +N +LRDALLI+INGIAAGMRNTG
Sbjct: 1109 IEMILAKTDPRIAALYEEVLVNDPEEKKLGAELRERLQRCQGAILKVTGHENLLSNNPTLSKLISMRSPFVDPINILQVEVLRRLRQDPNNMRLRDALLISINGIAAGMRNTG 1221          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_NITEC (Phosphoenolpyruvate carboxylase OS=Nitrosomonas eutropha (strain C91) GN=ppc PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.803e-20
Identity = 50/113 (44.25%), Postives = 76/113 (67.26%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLV-SESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K+D  IA RY E++  SE RQ +   +R E     K++  ++GH +L ++N +L R I  R PY++PMN LQVE+L+R R  DD+  +R A+ +TING+A G+RN+G
Sbjct:  821 MDMVLAKSDLGIASRYAELVTDSELRQYVFTAIRTEWELCVKWLFAITGHTELLQDNPTLARSIRIRTPYIDPMNHLQVELLRRYRSGDDDDAIRRAIHLTINGVATGLRNSG 933          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_MARMS (Phosphoenolpyruvate carboxylase OS=Marinomonas sp. (strain MWYL1) GN=ppc PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.852e-19
Identity = 48/112 (42.86%), Postives = 79/112 (70.54%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL KA+  IA+ Y++ LV E  Q LG  LR +L    + V ++   E+L E+N+++R+ I+ R PY++P++ LQ E+L R R+D++N ++  AL+IT+ GIA+GM+NTG
Sbjct:  765 LDMVLAKAEPEIAEYYEKRLVGEELQGLGRLLRGKLKQVSELVKMLKKQERLIEDNKTIRQSIDVRNPYIDPLHYLQAELLYRSRKDEENAEVNKALMITMAGIASGMQNTG 876          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_NITEU (Phosphoenolpyruvate carboxylase OS=Nitrosomonas europaea GN=ppc PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.849e-18
Identity = 46/113 (40.71%), Postives = 75/113 (66.37%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVS-ESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K+D  IA RY E++   E RQ +   +R E     K++  ++G+ +L ++N +L R I  R PY++P+N LQ+E+L+R R  DD+  +R A+ +TING+A G+RN+G
Sbjct:  821 MDMVLSKSDLGIASRYAELVTDPELRQSVFTSIRTEWELCMKWLFAITGYSELLQDNPTLARSIRIRTPYIDPLNHLQIELLRRYRSGDDDDTVRRAIHLTINGVATGLRNSG 933          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_ALCBS (Phosphoenolpyruvate carboxylase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ppc PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.565e-17
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESR--QELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            +EMVL K+D  +A  Y+E L  +      LG  LR  L  T   +  ++G E L +NN  +R  I  R PY +P+++LQ E++ RLRQ D +  L  AL++TI GIAAG+RNTG
Sbjct:  775 LEMVLAKSDLRVAAWYEERLAGDDPGLMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIRVRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGIAAGLRNTG 888          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_NOCFA (Phosphoenolpyruvate carboxylase OS=Nocardia farcinica GN=ppc PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.553e-17
Identity = 43/113 (38.05%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            +  V+ K+D  IA RY E++   + R ++   +R E   T +    ++GH++L  +NRSL   I +R PYL P+N +QVE+L+RLR  DD+  ++  +L+T+NG+A  +RN+G
Sbjct:  811 LAQVMAKSDLDIAARYAELVDDAALRDQIFGMIREEHARTLRMHAAITGHDQLLADNRSLAESIHNRFPYLEPLNQMQVELLRRLRSGDDSELVKRGILLTMNGLATALRNSG 923          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_LACDA (Phosphoenolpyruvate carboxylase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.014e-16
Identity = 42/112 (37.50%), Postives = 75/112 (66.96%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K++  IA++Y ++   E+ + +   +++E   T++ +L + GH KL E+N SL R ++ RLPY N +N +Q+E++KR RQ+  +      + ITING+A+G+RN+G
Sbjct:  798 VDMVLSKSNMEIAEKYADLCEDEATRSVFDIIKKEWELTKEVILQIEGHSKLLEDNPSLERSLDYRLPYFNVLNYVQLEMIKRGRQEKLSGIYESIIHITINGVASGLRNSG 909          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_BURVG (Phosphoenolpyruvate carboxylase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.325e-16
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 336
            ++MVL K D  +A RY +++     R+ +   +  E   T + +  ++GHE     N  L R I++R PYL+P+N LQVE++KR R  D N +LR  + +TINGIAAG+RNTG
Sbjct:  885 MDMVLAKTDLAVASRYAQLVADRKLRKHVFERIVAEWERTAQALAEITGHEGRLATNPLLARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 997          
BLAST of EY692081 vs. ExPASy Swiss-Prot
Match: CAPP_PSEHT (Phosphoenolpyruvate carboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.730e-16
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 1
Query:    1 IEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHK--LRDALLITINGIAAGMRNTG 336
            +EMV  KAD+ +++ YD  LV +  + LG  LR+EL      V  +S  + L  +   ++  I  R PY +P+N+LQVE+L+R R  D+  +  + +AL+IT+ GIAAGMRNTG
Sbjct:  768 LEMVFSKADSWLSEHYDNALVEDMYKPLGVTLRKELAEAISLVQSLSPQKSLLADQPWIKESIALRNPYTDPLNVLQVELLRRARSSDNGSEGDIDNALMITMTGIAAGMRNTG 881          
The following BLAST results are available for this feature:
BLAST of EY692081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CAPP4_ARATH1.076e-4277.68Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis t... [more]
CAPP2_CHLRE2.574e-2857.52Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas... [more]
CAPP_NITEC9.803e-2044.25Phosphoenolpyruvate carboxylase OS=Nitrosomonas eu... [more]
CAPP_MARMS2.852e-1942.86Phosphoenolpyruvate carboxylase OS=Marinomonas sp.... [more]
CAPP_NITEU1.849e-1840.71Phosphoenolpyruvate carboxylase OS=Nitrosomonas eu... [more]
CAPP_ALCBS1.565e-1742.98Phosphoenolpyruvate carboxylase OS=Alcanivorax bor... [more]
CAPP_NOCFA4.553e-1738.05Phosphoenolpyruvate carboxylase OS=Nocardia farcin... [more]
CAPP_LACDA1.014e-1637.50Phosphoenolpyruvate carboxylase OS=Lactobacillus d... [more]
CAPP_BURVG1.325e-1641.59Phosphoenolpyruvate carboxylase OS=Burkholderia vi... [more]
CAPP_PSEHT1.730e-1641.23Phosphoenolpyruvate carboxylase OS=Pseudoalteromon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-E07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692081 ID=EY692081; Name=EY692081; organism=Citrus sinensis; type=EST; length=967bp
ATAGAGATGGTTTTAGGGAAGGCAGACACTCATATAGCCAAGCGCTATGA
TGAAGTCCTTGTTTCAGAGAGTAGGCAAGAGCTTGGTGCTGAGCTAAGGA
GGGAGCTCTTAACAACTGAGAAGTACGTACTTGTGGTTAGTGGGCATGAG
AAGCTATCTGAGAATAACCGCAGTTTGAGGAGGCTGATTGAGAGCAGACT
CCCATATCTCAATCCTATGAATATGTTGCAGGTGGAGATACTGAAGAGAT
TGAGACAGGATGATGATAACCATAAACTCAGAGATGCATTGCTCATCACT
ATAAATGGAATAGCTGCTGGTATGAGGAACACAGGTTAAGTCAATTCGCT
AGCTGGTTTAACACAGGTTAAGTTTAAATCGCTTGTATGCATATCGGGAA
GACAGGTTTAGTAAAATCTTGCTTGTCATCTGCTTATGTATGCCCGGAAA
CTACTCCTATTTCTATTTTTGTAATTTTCTTTTTAGAACTGCGGCTTGAT
GGTTGAGGGCACAACTAAATGTACTTGACATTTGGCTCTGGGGAAAAAAT
TTGTGGAAATTTTTTCGTTATGTAGTATTTTTGGGAGCTCCACAAAATAT
AATAATCTATAAGAAACACAAAATTAAATATGGGGCGGGCGCTCCTAAAG
GATCCAATTTTTACGTACCCATGGCTTGGAACGCCATATCTACTTCCAAA
GTGGGCCCCTAAATTTCAATTTCCTTGGGGACTTCCTTTTATTCGTCTGA
GAAGGATCGGGAAAAAACCCCGGGAGTTACCCCACATTATTTCCCCCCTG
TGTGCGACCCATCCCCCCCCTTTTTCCCCCACCTAGGGAGTAGATAAACA
AGAAAAAGGGCCCCCCCCCCCCTTCCACCCCCTCCACCCCACCATACAAT
TACCCGACCCCCCCTACAATGTGGGGCAATATACGTGCGACAACCCTCCC
CTCCCCGGTTTCATAGC
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