EY692063

Overview
NameEY692063
Unique NameEY692063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 4.820e-67
Identity = 136/211 (64.45%), Postives = 154/211 (72.99%), Query Frame = 1
Query:   16 MASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDS-SAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASW-LLPIPKVA---------------------DLNTGQAQEPYVFPDMDPYLELDYGHVDTNLEAQEQKSSG 579
            MASKLCDSCKSATA ++CR D+AFLC++CD+K+HAANKLASRHARVW+CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSV S  +VK      VNFLD D Y   +DG +G    EE EAASW LLP PK                       ++NTGQ    Y+F D DPYL+LDYG+VD  +E+ EQ SSG
Sbjct:    1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKH---TAVNFLD-DCYFSDIDG-NGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQ---QYLFSDPDPYLDLDYGNVDPKVESLEQNSSG 203          

HSP 2 Score: 23.0978 bits (48), Expect = 4.820e-67
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  578 GTEGVVPVQTKNVK 619
            GT+GVVPV+ + V+
Sbjct:  203 GTDGVVPVENRTVR 216          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 8.485e-49
Identity = 104/188 (55.32%), Postives = 124/188 (65.96%), Query Frame = 1
Query:   19 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLELDYGHVDTNLEAQEQKSSGH 582
            +S+LCDSCKS  AT+FCRAD+AFLC +CD KIH ANKLASRH RVW+CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPL+RRHERVP+TPFYD+V  +   +     VNF+DED          GDV+      ASWLL    +   N               + +LDY  ++      E+ SSG+
Sbjct:    4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA---KSASSSVNFVDED---------GGDVT------ASWLLAKEGIEITNL--------------FSDLDYPKIEV---TSEENSSGN 156          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.604e-39
Identity = 85/177 (48.02%), Postives = 109/177 (61.58%), Query Frame = 1
Query:   19 ASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLP--IPKVADLNTG----QAQEPYVFPDMDPYLELDY 531
            A++ CD+CKS TA VFCR DSAFLC+ CDT+IH+     +RH RVWVCEVCEQAPA VTCKADAAALCV+CD DIHSANPLA RHERVPV  F+DS +++  K         L        VD  +  V  ++     WLLP    + A +  G    +    ++F D D  ++ ++
Sbjct:   18 AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSS---TTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF 187          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.730e-37
Identity = 78/147 (53.06%), Postives = 101/147 (68.71%), Query Frame = 1
Query:    4 RVREMASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLP 444
            +V    ++ CD+C+SA  TV+CRADSA+LC +CD ++HAAN+LASRH RV VC+ CE+APA   CKADAA+LC TCD +IHSANPLARRH+RVP+ P  +   SS     +        E+R    V G+  +   +EAEAASWLLP
Sbjct:    3 KVESNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRL---VLGQE-EEDEDEAEAASWLLP 145          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 9.107e-35
Identity = 77/170 (45.29%), Postives = 104/170 (61.18%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYL--DHVDGRSGDVSREEAEAASWLLPIPKVADLNTGQAQEPYVFPDMDPYLEL-DY 531
            CD+C+S   TV+C ADSA+LC++CD ++H+AN++ASRH RV VCE CE+APA   C+AD A+LC  CD ++HSANPLARRH+RVP+ P   +  SS     +       D ++ L  D  +G  GD  ++  E ASWL P    +D N        +F   D YL L DY
Sbjct:   20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGD--KDAKEVASWLFP---NSDKNNNNQNNGLLF--SDEYLNLVDY 182          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.903e-34
Identity = 71/153 (46.41%), Postives = 91/153 (59.48%), Query Frame = 1
Query:   22 SKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQGNGGVVNFLDEDRYLDHVDGRSGDVSREEAEAASWLLPIP--KVADLNTG 474
            ++ CD+C+SA  TV+C ADSA+LC  CD ++HAAN++ASRH RV VC+ CE APA   CKADAA+LC  CD +IHSANPLARRH+RVP+ P   +  SS                           D   ++ E ASWLLP P   + + N G
Sbjct:   13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET-------------------DADNDEDDREVASWLLPNPGKNIGNQNNG 146          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.844e-17
Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 291
            CD C+ A ATV C AD A LC  CD +IHAANKLAS+H R+ +         C++C++  A + C  D A LC  CD  IH AN  +  H+R   T
Sbjct:    5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLAT 100          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.492e-16
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVKQ 330
            CD C+ A AT+ C AD A LC  CD ++HAANKLAS+H R+++         C++C +  A + C  D A LC  CD   H+ N  +  H+R   T    ++ S++  Q
Sbjct:    5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQ 113          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.254e-16
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVW------------VCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVDSSAVK 327
            CD C    A+VFC AD A LC  CD ++H ANKLAS+H R              +C++C+   A + C+ D A LC  CD  IH+AN   ++H+R  +T    S  SS  K
Sbjct:    5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115          
BLAST of EY692063 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 4.250e-16
Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   31 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWV---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 291
            C+ C++A ATV C AD A LC  CD KIHAANKLA +H RV +         C++C++A     C  D A LC  CD  IH+ NP    H+R  +T
Sbjct:    5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLT 100          
The following BLAST results are available for this feature:
BLAST of EY692063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
COL4_ARATH4.820e-6764.45Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL3_ARATH8.485e-4955.32Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL5_ARATH1.604e-3948.02Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL1_ARATH9.730e-3753.06Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
CONS_ARATH9.107e-3545.29Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
COL2_ARATH5.903e-3446.41Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
STO_ARATH3.844e-1744.79Salt tolerance protein OS=Arabidopsis thaliana GN=... [more]
STH_ARATH2.492e-1637.61Salt tolerance-like protein OS=Arabidopsis thalian... [more]
STHX_ARATH3.254e-1639.64Probable salt tolerance-like protein At1g75540 OS=... [more]
STHY_ARATH4.250e-1644.79Probable salt tolerance-like protein At1g78600 OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-C08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692063 ID=EY692063; Name=EY692063; organism=Citrus sinensis; type=EST; length=1037bp
CCACGCGTCCGAGAAATGGCATCCAAGCTGTGTGACTCGTGCAAATCGGC
AACGGCGACTGTGTTCTGCCGGGCCGACTCGGCGTTCTTGTGTGTCAACT
GCGACACCAAAATCCACGCGGCCAACAAGCTGGCGTCGCGCCACGCGCGT
GTCTGGGTTTGCGAGGTGTGTGAGCAGGCGCCGGCCCACGTCACGTGCAA
GGCAGACGCTGCGGCGCTCTGCGTCACGTGCGACCGCGACATCCATTCCG
CCAACCCACTGGCCCGGCGCCACGAGCGAGTCCCCGTGACACCCTTCTAC
GACTCAGTCGACTCCTCTGCCGTCAAGCAAGGCAACGGCGGAGTAGTCAA
CTTCTTAGACGAAGACCGCTACTTGGACCACGTCGACGGGAGAAGCGGTG
ACGTCAGCAGGGAGGAAGCAGAGGCGGCTTCGTGGCTGCTGCCGATCCCG
AAGGTGGCGGATTTGAACACGGGTCAGGCGCAAGAGCCGTATGTGTTCCC
GGATATGGATCCGTATTTGGAATTAGATTACGGGCATGTGGATACGAATC
TAGAAGCCCAGGAACAAAAAAGTTCGGGGCACTGAAGGTGTTGTTCCCGT
ACAAACCAAAAACGTTAAGCCTAACGGCCAATTTGGTCAACGATGCATGG
TTTAGACCTCCATTTTCCCAGGCTCCCAATCTATAGGGGTAAGGGCTACA
ACATCCCACTCCACGGTGCCTTCAGTCAAAAAGGGGGTCCCCCCTCCACC
CTTGAAAGGGGGGGAAGGGGTGCCCTAATAGAAAATTAATTGCNAAAAAA
CGTAATAATAACTAATCCCTTACTGTATCAAGGGATCGGGGGGTGTGGTA
GGGAAGTAAATATAATGAAAATGGACGGGTCAAAATCTTCCTTAAATCTG
AAAAAACGTGAGACAGAAAGGGTTAGTATGAAGCAGACTAGAGAGAATGA
ATTGAATATAGATAAAAAGAACATAAAAATTTATGTGAAAAGATAAGACT
AAATGCTAAAAAATAAGCATACTATACATATAGTGAT
back to top