EY692061

Overview
NameEY692061
Unique NameEY692061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692061 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.967e-38
Identity = 92/160 (57.50%), Postives = 110/160 (68.75%), Query Frame = 2 
Query:   38 AVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 508
            AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   12 AVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY692061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH1.967e-3857.50Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-C05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692061 ID=EY692061; Name=EY692061; organism=Citrus sinensis; type=EST; length=928bp
CGGACGCGTGGGCGGACGCGTGGGTACGGCGTACGCGGCGGTGTTAACTC
CACGTGTCCCCTCAACCACCACCGTCAAAGTCAAATCTTCTCACTGCTTT
GCTCTTCCCTGCCTCCCTCCTCGTTCGTCAACGTCACCATTCTCTTCTTC
CATTAAACAAGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGAG
CCTCTTCCTCAGAAGAGACATCCACAGTTGATGCAGATGAACTTTTTTCA
GACTTGAAGGAAAAGTGGGATGCCGTTGAAAACAAGTCCACGGTACTTCT
CTATGGAGGTGGGGCAATAGTGGCTGTTTGGTTATCCTCAACTATTGTTG
GTGCCATCAATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGGA
CTTGGTTATACTGGATGGTTTGTCTACAGATACCTTCTCTTCAAGTCAAG
CAGAAAAGAACTAGCCACGGATATTGAAGCACTGAAGAAGAAGATTGCTG
GAACTGAATAGATTGTACATTCTGGAGGCAATTCATGTTTGTCCCTGATA
GTCATTTATTTTGGTCCTCTATCATTGCATATGAAGGCACTTGTATCCTG
TAAAAGAAGCTGCGTACGGATTCGTTTTATCCCTGTAATTTCCAGTAAAT
CCCTGGAATAAAAAATTTTGAAAAAGTTATGTGTAACTAAAAAAAAAAAA
TAAAATAAAAAAAGTTAAAAAAAAAAATAAAAAAGGGGGGGGCCCCTCCA
AAAAAAAAACAAACTTAACAAACCGTGGGAGCGAAAGCAAAACACTCTTC
TAAATAGGGGCACCAAAATTTAAAATTTCAAGGGGGCGGGCTTTTTAAAA
AAGCCCGGGGAAGGGGGAAAAACCCCGGGGGGTTAACCCAAATATTAAAT
CTGCCTTTTGGGAAAAATAATTCCCCCC
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