EY692052

Overview
NameEY692052
Unique NameEY692052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692052 vs. ExPASy Swiss-Prot
Match: Y1927_ARATH (LIM and UIM domain-containing At1g19270 OS=Arabidopsis thaliana GN=At1g19270 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.824e-25
Identity = 65/151 (43.05%), Postives = 77/151 (50.99%), Query Frame = 1 
Query:    1 HEMMHAWPFNRGFICFKLIYFLF****ARNL*WKYSTGYPNLRPDVQEGICQVLAHMWLESEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGKRSDFEKDLGKFFKHQIESDTSSAYGDGFREGSKAVNKYGLRRTLDHIQMTGSFP 453
            HEMMHAW   +GF                            L  DV+EGICQV+AH WL++E+                              KKG RS +E+ LG+FFKHQIESD S  YGDGFR G  AV+KYGLR+TL+HIQMTG FP
Sbjct:  418 HEMMHAWMRLKGF--------------------------RTLSQDVEEGICQVMAHKWLDAEL-----------AAGSTNSNAASSSSSSQGLKKGPRSQYERKLGEFFKHQIESDASPVYGDGFRAGRLAVHKYGLRKTLEHIQMTGRFP 531
The following BLAST results are available for this feature:
BLAST of EY692052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1927_ARATH9.824e-2543.05LIM and UIM domain-containing At1g19270 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-B05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692052 ID=EY692052; Name=EY692052; organism=Citrus sinensis; type=EST; length=949bp
CATGAGATGATGCACGCATGGCCTTTTAATAGAGGTTTTATTTGTTTCAA
GTTAATATACTTCCTATTCTAATGATAATAAGCTAGGAACTTATAATGGA
AGTATTCGACAGGTTATCCCAATTTGAGGCCAGACGTACAAGAAGGTATT
TGCCAGGTATTGGCTCATATGTGGTTGGAATCTGAGATTTATTCTGGGTC
AGGTAGTGATGTTGCTTCATCCTCCTCATCCTCTGCCTCCTCTTCTTCAT
CCTCACCGTCATCCTCATCCACATCATCTAAGAAGGGTAAACGTTCTGAC
TTCGAGAAGGACCTTGGTAAATTTTTTAAACACCAGATTGAGTCAGATAC
ATCATCAGCCTATGGAGATGGATTCAGGGAAGGTAGTAAGGCAGTGAATA
AGTATGGCCTCAGAAGGACTTTAGACCACATTCAAATGACGGGAAGCTTT
CCATACTGATTTTTGGAGTGGATACACATTGATCTCTGCCAACATGATTG
CCAAATACCTTTAAGCCTTATGGATAGCTATAGGAATAAAGTCCATATCC
TGAAAAAAGTGAAGAAAAAGGCTCTTATCCCTGGCCCAATTTGCGGTAAT
TTTTCTAGACCGGCTGACCAAAAATTGCTTCCCATAATTATTAATTTATG
GCCCCGTGTTTTAAAAACTTCTTTAAAAAAACCCTTGATAAAAAAAAAAA
AAAAAGGGCGGGCGGCTCCTGAAGGATCCAAAGCTTACATAACCCGAGGA
AGGGGAAAGTCCTAAGCTCCTTTAATAGGGGGCCCCAAGATTTTAATTTA
CCTTGGGCACGCTGTTTTTATTCCATTCTTAGATTGGGAAAAAAACCCCT
TGGGGTCTAATCCAACTAATTTAATCCATCCTTGTAAACACCACACTCTC
CCCCCTTTTTCCCCTCAACCTAGGGGGTATAATATTAATAAAAAAAAAG
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