EY692042

Overview
NameEY692042
Unique NameEY692042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYNC1_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arabidopsis thaliana GN=SYNC1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.418e-57
Identity = 96/132 (72.73%), Postives = 104/132 (78.79%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHGTP 446
            ME MA      CI+RL++VAS PF RI+YT           +GK F+N VEWGIDLASEHERYLTEV FQKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RI+  G P
Sbjct:  388 MELMAKNFDSGCIDRLKLVASTPFGRITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLP 519

HSP 2 Score: 54.299 bits (129), Expect = 3.418e-57
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGLP+EPYEWYLDL+R+GTVK     L       LFAT +++ RD I
Sbjct:  515 EMGLPIEPYEWYLDLRRYGTVKHCGFGL-GFERMILFATGLDNIRDVI 561
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYNC3_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.125e-53
Identity = 93/134 (69.40%), Postives = 102/134 (76.12%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKH-FENKVEWGIDLASEHERYLTEVKF-QKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHGTP 446
            ME M     + C  RL MVA   F+R++YT           +GK  F+NKVEWGIDLASEHERYLTEV+F QKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RI+  G P
Sbjct:  385 MELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLP 518

HSP 2 Score: 52.7582 bits (125), Expect = 8.125e-53
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGLP+EPYEWYLDL+R+GTVK     L        FAT I++ RD I
Sbjct:  514 EMGLPMEPYEWYLDLRRYGTVKHCGFGL-GFERMIQFATGIDNIRDVI 560
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_DESVV (Asparaginyl-tRNA synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=asnS PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.476e-38
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 3 
Query:   87 INRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            + RLR +A  PF R SYT          K GK FE  V +G+DL +EHERYL E  F KPVIVYNYPK IKAFYMRLNDD +TVAAMDVLVP++GELIGGSQREER DV++ RI   G
Sbjct:  292 VERLRQIADEPFARCSYTEAIELLL---KSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMG 406

HSP 2 Score: 33.8834 bits (76), Expect = 9.476e-38
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTV 495
            +MG  LE Y WYLDL+RFG+V
Sbjct:  404 EMGQNLEDYWWYLDLRRFGSV 424
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_DESVH (Asparaginyl-tRNA synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=asnS PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.476e-38
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 3 
Query:   87 INRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            + RLR +A  PF R SYT          K GK FE  V +G+DL +EHERYL E  F KPVIVYNYPK IKAFYMRLNDD +TVAAMDVLVP++GELIGGSQREER DV++ RI   G
Sbjct:  292 VERLRQIADEPFARCSYTEAIELLL---KSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMG 406

HSP 2 Score: 33.8834 bits (76), Expect = 9.476e-38
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTV 495
            +MG  LE Y WYLDL+RFG+V
Sbjct:  404 EMGQNLEDYWWYLDLRRFGSV 424
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ACTSZ (Asparaginyl-tRNA synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=asnS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.024e-36
Identity = 74/126 (58.73%), Postives = 85/126 (67.46%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            +EF +    K  I RL    + PF +I YT          K GK FE  V WGIDL+SEHERYL E  F+ PV+V NYPKGIKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+  R+
Sbjct:  286 LEFFSKHVDKDVITRLEHFVNSPFAQIDYTDAIDVLV---KSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKGIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDKRM 408

HSP 2 Score: 33.4982 bits (75), Expect = 1.024e-36
Identity = 17/48 (35.42%), Postives = 26/48 (54.17%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+++GTV      L       ++ T +++ RD I
Sbjct:  410 EMGLKPEDYWWYRDLRKYGTVPHSGFGL-GFERLIVYVTGVQNIRDVI 456
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ACTPJ (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=asnS PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.876e-35
Identity = 73/126 (57.94%), Postives = 85/126 (67.46%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  I RL    + PF ++ YT          K GK FE  V WGIDL+SEHER+L E  F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ TR+
Sbjct:  286 MQFFAKHIDKDVITRLENFIASPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRM 408

HSP 2 Score: 31.187 bits (69), Expect = 1.876e-35
Identity = 16/48 (33.33%), Postives = 26/48 (54.17%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+++GTV      L       ++ T +++ R+ I
Sbjct:  410 EMGLNPEDYWWYRDLRKYGTVPHSGFGL-GFERLIVYVTGLQNIREVI 456
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ACTP7 (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=asnS PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.876e-35
Identity = 73/126 (57.94%), Postives = 85/126 (67.46%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  I RL    + PF ++ YT          K GK FE  V WGIDL+SEHER+L E  F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ TR+
Sbjct:  286 MQFFAKHIDKDVITRLENFIAAPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRM 408

HSP 2 Score: 31.187 bits (69), Expect = 1.876e-35
Identity = 16/48 (33.33%), Postives = 26/48 (54.17%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+++GTV      L       ++ T +++ R+ I
Sbjct:  410 EMGLNPEDYWWYRDLRKYGTVPHSGFGL-GFERLIVYVTGLQNIREVI 456
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_ACTP2 (Asparaginyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=asnS PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.876e-35
Identity = 73/126 (57.94%), Postives = 85/126 (67.46%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRI 428
            M+F A    K  I RL    + PF ++ YT          K GK FE  V WGIDL+SEHER+L E  F+ PV+V NYPK IKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ TR+
Sbjct:  286 MQFFAKHIDKDVITRLENFIAAPFAQVDYTDAIEILL---KSGKEFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDTRM 408

HSP 2 Score: 31.187 bits (69), Expect = 1.876e-35
Identity = 16/48 (33.33%), Postives = 26/48 (54.17%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+++GTV      L       ++ T +++ R+ I
Sbjct:  410 EMGLNPEDYWWYRDLRKYGTVPHSGFGL-GFERLIVYVTGLQNIREVI 456
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_SERP5 (Asparaginyl-tRNA synthetase OS=Serratia proteamaculans (strain 568) GN=asnS PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.443e-35
Identity = 70/130 (53.85%), Postives = 87/130 (66.92%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            M+F A    K  I+RL+   +  F ++ YT            G+ FEN V WGIDL+SEHERYL E  F+ PV+V NYPK IKAFYMR+NDD KTVAAMDVL P +GE+IGG+QREER DV+  R++  G
Sbjct:  285 MQFFAERVDKDAIDRLQRFVTSDFAQVDYTEAVEILIA---SGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDQRLEAMG 411

HSP 2 Score: 32.7278 bits (73), Expect = 2.443e-35
Identity = 18/47 (38.30%), Postives = 24/47 (51.06%), Query Frame = 1 
Query:  436 MGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  410 MGLNKEDYWWYRDLRRYGTVPHAGFGL-GFERLIAYVTGVQNVRDVI 455
[Close]
BLAST of EY692042 vs. ExPASy Swiss-Prot
Match: SYN_KLEP7 (Asparaginyl-tRNA synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=asnS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.443e-35
Identity = 71/130 (54.62%), Postives = 86/130 (66.15%), Query Frame = 3 
Query:   51 MEFMANTPYKSCINRLRMVASPPFERISYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKTRIKGHG 440
            M+F A    K  I+RL+   +  F ++ YT            GK FEN V WG+DL+SEHERYL E  F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+  R+   G
Sbjct:  285 MQFFAERVDKDAIDRLQRFITADFAQVDYTDAVTILENC---GKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMG 411

HSP 2 Score: 33.4982 bits (75), Expect = 2.443e-35
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 1 
Query:  433 DMGLPLEPYEWYLDLQRFGTVKQYRVWLKALNGRFLFATCIEHFRDAI 576
            +MGL  E Y WY DL+R+GTV      L        + T +++ RD I
Sbjct:  409 EMGLNKEDYWWYRDLRRYGTVPHSGFGL-GFERLIAYVTGVQNVRDVI 455
The following BLAST results are available for this feature:
BLAST of EY692042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
SYNC1_ARATH3.418e-5772.73Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arab... [more]
SYNC3_ARATH8.125e-5369.40Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arab... [more]
SYN_DESVV9.476e-3863.56Asparaginyl-tRNA synthetase OS=Desulfovibrio vulga... [more]
SYN_DESVH9.476e-3863.56Asparaginyl-tRNA synthetase OS=Desulfovibrio vulga... [more]
SYN_ACTSZ1.024e-3658.73Asparaginyl-tRNA synthetase OS=Actinobacillus succ... [more]
SYN_ACTPJ1.876e-3557.94Asparaginyl-tRNA synthetase OS=Actinobacillus pleu... [more]
SYN_ACTP71.876e-3557.94Asparaginyl-tRNA synthetase OS=Actinobacillus pleu... [more]
SYN_ACTP21.876e-3557.94Asparaginyl-tRNA synthetase OS=Actinobacillus pleu... [more]
SYN_SERP52.443e-3553.85Asparaginyl-tRNA synthetase OS=Serratia proteamacu... [more]
SYN_KLEP72.443e-3554.62Asparaginyl-tRNA synthetase OS=Klebsiella pneumoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-A02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692042 ID=EY692042; Name=EY692042; organism=Citrus sinensis; type=EST; length=1040bp
ACCCCGGCCGGTCCCGGTCCCGGGAATTCCGGGTCGACCCACGCCTCCGC
ATGGAGTTTATGGCTAACACCCCTTATAAAAGTTGCATTAACCGTCTAAG
AATGGTTGCTTCCCCTCCCTTTGAACGCATATCATACACTGAAGCAGTAG
AGCTACTAGAGGTTGCTGTGAAGGAGGGGAAACATTTTGAGAATAAAGTG
GAGTGGGGGATTGATTTGGCATCTGAGCATGAAAGATACTTAACTGAGGT
CAAATTTCAGAAGCCTGTCATTGTGTACAACTATCCAAAAGGAATCAAAG
CATTTTACATGAGGCTCAATGATGACTTGAAGACTGTGGCAGCTATGGAT
GTCCTTGTACCTAAGGTAGGAGAGTTAATTGGTGGGAGCCAAAGGGAAGA
GCGTTATGATGTAATCAAGACCAGAATAAAGGGACATGGGACTCCCTCTT
GAACCATACGAGTGGTACCTTGACCTGCAGCGCTTTGGGACAGTGAAACA
ATATCGTGTTTGGCTTAAGGCTTTGAACGGAAGATTTCTTTTTGCCACAT
GCATCGAACACTTTAGAGATGCTATCCCCTTTCCCCCAGAATCCCCGGAA
GAACCATATCCTCTAATCCTTGAATTTGCCAAATTGCACTTTATGAAAAA
ACCCCTGATTTTATACATCTTTTGGCTGATTCCCAGCATTGCTAGACCCC
CGACAAACCATAACTCACTGAACTTCCTTTTATCCCCCTATTCCTATAAG
AAAGAAGATATTTTCCCGGGATATAACCTCCCATGCCGACCTATAACCGG
GCTGCATTAATTTACTTATTTTAATCAAGATAAATCTTATAACTAATCAT
TTTTGATTGTGCATTACTACATGTGTGCTTCGGGACGGAATATCCACGAA
TTTTATTAAAAGATTTAAAATATAATAGACAAAAGATAATAGTGTCTAAA
AATCTTTTAGGAAAAAGGTATACAAAAAATAATACATAATAAACACAACA
AAAAAACAATTAAAAATAAGGGGAGGGAAGATAAAATCTA
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