EY692023

Overview
NameEY692023
Unique NameEY692023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 2.218e-78
Identity = 146/170 (85.88%), Postives = 147/170 (86.47%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 6.454e-78
Identity = 145/170 (85.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 6.454e-78
Identity = 145/170 (85.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 6.454e-78
Identity = 145/170 (85.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 8.429e-78
Identity = 145/170 (85.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 8.429e-78
Identity = 145/170 (85.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.878e-77
Identity = 142/170 (83.53%), Postives = 147/170 (86.47%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.452e-77
Identity = 144/170 (84.71%), Postives = 145/170 (85.29%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.452e-77
Identity = 144/170 (84.71%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAF TFFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFYTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
[Close]
BLAST of EY692023 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 3.203e-77
Identity = 144/170 (84.71%), Postives = 145/170 (85.29%), Query Frame = 3 
Query:   45 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFQCXXXXXXXXXXXXFFWRGCLLT*EKKSKLGF 554
            MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF                 R   +   KKSKLGF
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER-LSVDYGKKSKLGF 169
The following BLAST results are available for this feature:
BLAST of EY692023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 407
Match NameE-valueIdentityDescription
TBA2_ARATH2.218e-7885.88Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thali... [more]
TBA_PRUDU6.454e-7885.29Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ... [more]
TBA6_ARATH6.454e-7885.29Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=T... [more]
TBA3_HORVU6.454e-7885.29Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 ... [more]
TBA4_GOSHI8.429e-7885.29Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 S... [more]
TBA2_GOSHI8.429e-7885.29Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 S... [more]
TBA_DAUCA1.878e-7783.53Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 S... [more]
TBA1_PEA2.452e-7784.71Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE... [more]
TBA1_GOSHI2.452e-7784.71Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 S... [more]
TBA2_ORYSJ3.203e-7784.71Tubulin alpha-2 chain OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-F08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692023 ID=EY692023; Name=EY692023; organism=Citrus sinensis; type=EST; length=1010bp
CAATTACTTTACGTCGTCGTTTTTTCTTCTCTTAATCTGCGAAAATGAGA
GAGTGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAAATGC
CTGCTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGCCAAA
TGCCAAGTGATAAGACAGTCGGAGGTGGCGACGATGCTTTCAACACCTTT
TTCAGTGAAACTGGTGCAGGGAAGCACGTGCCTCGTGCTGTCTTTGTTGA
TCTTGAGCCCACTGTCATTGATGAAGTGAGGACCGGAACTTACCGCCAGC
TCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAAGACGCTGCCAACAAC
TTCGCCCGTGGCCACTATACCATTGGTAAGGAGATTGTTGATCTCTGCCT
TGACCGCATCAGGAAGCTGGCTGATAACTGCACTGGTCTCCAGGGATTCC
TTGTTTTTCAATGCTGATTGGTGGAGGAACTGGCTCTGGTCTTGGGTCTC
TTCTTCTGGAGAGGTTGTCTGTTGACATAGGAAAAAAAATCAAAGTTGGG
CTTTCAATGTTCTAACCATCTCCTCAGGTCTCCACCTTCTGATGGTGAGC
CCTAACTCATGTGAACTCTAAACCCACACTCTGTAAGAAGATATATGACG
TTGGTTGTTCTTATTAAAAAATGAAGCTGTTCTTTAAATTCTTCTACGAT
ACTCATATGAAATATTATAAAACAAATATATATTTATACCACAGAAAATT
GTTTGCCATGAACATATCATAATTATAATTACTTAAAAAAATAGTTAACA
AGATATTTAATAAGGGAATAATAGCAAAAATAAACAAGATAATATTTGAA
ACAAAACGACAAATCTAAATAATGCAAGCTCGCTGAACTAACTGCAAAGA
AAGAGCATTCGAGAACAAAAAAAATGTGCAAAACTAAAAGAAATAATATA
AACACAAGAAGAATCTCTATATATGAAAATATTCAATAATAAAAGATTAT
AACAGTAAAA
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