EY692004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_XENTR (Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.905e-14 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GL+F T+ + L FS+YGQV E +V DR S +S+GFGFVTF + E+A+ A+ MNGK++DGR I VD A Sbjct: 12 GLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_RANCA (Cold-inducible RNA-binding protein OS=Rana catesbeiana GN=cirbp PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.624e-13 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T + L FS+YGQ+ E +V DR + +S+GFGFVTF + E+A+ A++ MNGKT+DGR I VD A Sbjct: 12 GLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.427e-13 Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYAKAK 514 GL + T ++ L +AFS+YG V+++ I+ DR + +S+GFGFVTFAS E +A+ MNG+ LDGR I V+ A+++ Sbjct: 12 GLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.427e-13 Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYAKAK 514 GL++ TSN+ L +AF+ YG+++++ ++ DR + +S+GFGFVTF+S A+ MNGK LDGR I V+ A+++ Sbjct: 14 GLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.427e-13 Identity = 35/74 (47.30%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYAKAK 514 GL++ T+++ L FSQ+G V+++ I+ DR S +S+GFGFVTF + A+ EMNGK LDGRVI V+ A+++ Sbjct: 12 GLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSR 85
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_RAT (Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T+ + L FS+YGQ+ E +V DR + +S+GFGFVTF + ++A+ A+ MNGK++DGR I VD A Sbjct: 12 GLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_PONAB (Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T+ + L FS+YGQ+ E +V DR + +S+GFGFVTF + ++A+ A+ MNGK++DGR I VD A Sbjct: 12 GLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_MOUSE (Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T+ + L FS+YGQ+ E +V DR + +S+GFGFVTF + ++A+ A+ MNGK++DGR I VD A Sbjct: 12 GLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_HUMAN (Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T+ + L FS+YGQ+ E +V DR + +S+GFGFVTF + ++A+ A+ MNGK++DGR I VD A Sbjct: 12 GLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY692004 vs. ExPASy Swiss-Prot
Match: CIRBP_CRIGR (Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.476e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 293 GLSFYTSNKGLSDAFSQYGQVVEANIVMDRVSDKSKGFGFVTFASHEEAEKALSEMNGKTLDGRVIVVDYA 505 GLSF T+ + L FS+YGQ+ E +V DR + +S+GFGFVTF + ++A+ A+ MNGK++DGR I VD A Sbjct: 12 GLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 The following BLAST results are available for this feature:
BLAST of EY692004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692004 ID=EY692004; Name=EY692004; organism=Citrus sinensis; type=EST; length=1049bpback to top |