EY691995

Overview
NameEY691995
Unique NameEY691995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R+AY YKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYP+NI
Sbjct:   51 GKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R+AY YKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYP+NI
Sbjct:   51 GKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G RLAY YKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYP+NI
Sbjct:   50 GKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G RLAY YKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYP+NI
Sbjct:   50 GKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R+AY Y+A  +  GS  R +WGKV R+HGNSGVVRA F++NLP K+ G  VR+F+YP+NI
Sbjct:   46 GKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R+AY Y+A  +  GS  R +WGKV R+HGNSGVVRA F++NLP K+ G  VR+F+YP+NI
Sbjct:   46 GKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL35A_ICTPU (60S ribosomal protein L35a OS=Ictalurus punctatus GN=rpl35a PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.615e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R AY YKAK          +  R IWGKV R+HGNSG+VRAKF SNLPPK++G R+RV +YP+ +
Sbjct:   44 GKRCAYVYKAKKTTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R AY YKAK          +  R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:   44 GKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL35A_RAT (60S ribosomal protein L35a OS=Rattus norvegicus GN=Rpl35a PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R AY YKAK          +  R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:   44 GKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110          
BLAST of EY691995 vs. ExPASy Swiss-Prot
Match: RL35A_PONAB (60S ribosomal protein L35a OS=Pongo abelii GN=RPL35A PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   30 G*RLAYFYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPNNI 215
            G R AY YKAK          +  R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YP+ I
Sbjct:   44 GKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110          
The following BLAST results are available for this feature:
BLAST of EY691995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
R35A3_ARATH8.296e-2687.1060S ribosomal protein L35a-3 OS=Arabidopsis thalia... [more]
R35A1_ARATH8.296e-2687.1060S ribosomal protein L35a-1 OS=Arabidopsis thalia... [more]
R35A4_ARATH1.848e-2587.1060S ribosomal protein L35a-4 OS=Arabidopsis thalia... [more]
R35A2_ARATH1.848e-2587.1060S ribosomal protein L35a-2 OS=Arabidopsis thalia... [more]
RL33B_YEAST6.588e-1558.0660S ribosomal protein L33-B OS=Saccharomyces cerev... [more]
RL33A_YEAST6.588e-1558.0660S ribosomal protein L33-A OS=Saccharomyces cerev... [more]
RL35A_ICTPU3.615e-1355.2260S ribosomal protein L35a OS=Ictalurus punctatus ... [more]
RL35A_XENLA4.722e-1355.2260S ribosomal protein L35a OS=Xenopus laevis GN=rp... [more]
RL35A_RAT6.167e-1355.2260S ribosomal protein L35a OS=Rattus norvegicus GN... [more]
RL35A_PONAB6.167e-1355.2260S ribosomal protein L35a OS=Pongo abelii GN=RPL3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-C03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691995 ID=EY691995; Name=EY691995; organism=Citrus sinensis; type=EST; length=906bp
CACAAAGGAAGAGGTGGAGCGGCACGTGCGGCTAGCGTTTGGCTTACTTT
TACAAGGCCAAGACTAAGAAAAACGGGAGCCACTATCGTTGCATTTGGGG
AAAAGTTGCCAGATCTCACGGTAACAGCGGCGTCGTTCGTGCCAAGTTCA
AGTCCAATCTCCCTCCCAAATCCATGGGAGATAGAGTTAGGGTTTTCATG
TATCCCAACAACATATGAGCAGCATGGTTCGAGAAGCTACTAGATCGACA
AGTAAGATGTACCTTCTGAATTTGGGATTTATTCACTTAGCATTTATGTT
GCAAGATTTTGGAGTCAGGAGTTATACTGGCAAGCTGTTTTGGCTTTTGC
TACTGTTCCCTTAGTGTGGATTTTGGAACATTGATTTTAATGTTAATGCT
TAAGTTATTGGTTTAGGATTTTACTTATCAAGATGTGAATTTACTTTTTC
AAATGACAGCCATATGATGCATACTGAAAATGCATGATGACTCTAAACTG
CATATTTAAAAAAAAAGAAAAATGATAAAGGGCAGACAGCTCTCAAGAAT
ACAAAAAAAATATGCGAGTATTGTAAATTAATAAATTCTATTAAGAAACC
ACTAACATTGAATGAGAGGTAATAGAGAGTAGGAAATTATGAGTTGGATG
TATCACGCTTTAATAAAATAAAAATATAAAAGCAAAACTAAGTTAAAAAC
GATACGAAATAAATAAAAAAGCAAAGTAGATACGAATTACGTCTAAGGAC
AACGATGGTAAATTACACGTTGTAACTCTTTGGAACATCATAGCTAATGA
CCACCTTATATTTATACTCATCAGAAAATAAATTATGACAATTAGAAAAA
AAAATAAAAGTAAAATATAAATATTAATAAGAATGAATAAAATAAGGCTC
AATGTG
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