EY691982

Overview
NameEY691982
Unique NameEY691982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 8.451e-77
Identity = 122/137 (89.05%), Postives = 130/137 (94.89%), Query Frame = 1
Query:   64 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADND 474
            M+SS APSRK LSKIA+NRLQKELVEWQ+NPP GFKHKVTDNLQRWIIEV GAPGTLYAN+T++LQVDFPEHYPME+PQVIFL PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISILSMLSSST KQRP DND
Sbjct:    1 MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTEKQRPTDND 137          

HSP 2 Score: 50.0618 bits (118), Expect = 8.451e-77
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHEDKV 548
            YVKNCKNGR+PKET+ WFH+DKV
Sbjct:  139 YVKNCKNGRSPKETRWWFHDDKV 161          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.438e-76
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 1
Query:   64 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADND 474
            MTSSS+PSRKALSKIA NRLQKEL EWQVNPP GFKH+VTDNLQ+W+IEV GAPGTLYANET+ LQV+FP+HYPMEAPQVIF+PPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSS  KQRP DND
Sbjct:    1 MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPEKQRPTDND 137          

HSP 2 Score: 50.0618 bits (118), Expect = 1.438e-76
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHEDKV 548
            YVKNCKNGR+PKET+ WFH+DKV
Sbjct:  139 YVKNCKNGRSPKETRWWFHDDKV 161          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 5.926e-75
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 1
Query:   64 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADND 474
            MTSSSAPSRKALSKIA NRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYANET++LQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+SVCISILSMLSSS  KQRPADND
Sbjct:    1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRPADND 137          

HSP 2 Score: 50.0618 bits (118), Expect = 5.926e-75
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHEDKV 548
            YVKNCKNGR+PKET+ WFH+DKV
Sbjct:  139 YVKNCKNGRSPKETRWWFHDDKV 161          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.656e-69
Identity = 110/137 (80.29%), Postives = 127/137 (92.70%), Query Frame = 1
Query:   64 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADND 474
            MTSSS  +RK L+KIA+NRLQKE +EWQ NPP+GFKH+V+DNLQRWIIEV+G PGTLYANET++LQV+FPEHYPMEAPQVIF  PAPLHPHIYSNGHICLD+LYDSWSPAM +SS+C+SILSMLSSS+VKQ+P DND
Sbjct:    1 MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDND 137          

HSP 2 Score: 41.5874 bits (96), Expect = 2.656e-69
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHEDKV 548
            Y+KNCK+GR+PKET+  FH+DKV
Sbjct:  139 YLKNCKHGRSPKETRWRFHDDKV 161          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.416e-36
Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 1
Query:  112 SNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDPVM*RTV 495
            + RLQKEL++ + NPP        DNL +W+I V+G  G++Y  E F+LQ  F   YP+++P+VIF+   P+HPHIYSNGHICL ILYD+WSPA+TVSSVC+SILSMLS  T K RP D+   + R +
Sbjct:    6 AKRLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSKYVSRVL 133          

HSP 2 Score: 22.3274 bits (46), Expect = 8.416e-36
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHEDKV 548
            YV    N ++PKE +  FH+D V
Sbjct:  128 YVSRVLN-KSPKEVRWMFHDDTV 149          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.674e-33
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 1
Query:  118 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADN 471
            RLQKEL+  Q +PP G    +  V +++ +WI+++ GAPGTLY  E F+L   F   YP ++PQV+F     P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS   K+RP DN
Sbjct:    7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDN 128          

HSP 2 Score: 28.4906 bits (62), Expect = 3.674e-33
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHED 542
            YV+ C   + PK+TK W+H+D
Sbjct:  131 YVRTCN--KNPKKTKWWYHDD 149          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.785e-33
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 1
Query:  118 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADN 471
            RLQKEL+  Q +PP G    +  V +++ +WI+++ GAPGTLY  E F+L   F   YP ++PQV+F     P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS   K+RP DN
Sbjct:    7 RLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDN 128          

HSP 2 Score: 28.4906 bits (62), Expect = 4.785e-33
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHED 542
            YV+ C   + PK+TK W+H+D
Sbjct:  131 YVRTCN--KNPKKTKWWYHDD 149          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.377e-32
Identity = 64/122 (52.46%), Postives = 83/122 (68.03%), Query Frame = 1
Query:  118 RLQKELVEWQVNPPAGF---KHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP-APLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADN 471
            RLQKEL+  Q +PPAG    +  V + +  W I++ GA GT+Y  E F+L   F   YP E+PQV+F     P+HPH+YSNGHICL IL + WSPA++V SVC+SI+SMLSS   K+RP DN
Sbjct:    7 RLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSSCKEKRRPPDN 128          

HSP 2 Score: 29.6462 bits (65), Expect = 1.377e-32
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  480 YVKNCKNGRTPKETKGWFHED 542
            YVK C   + PK+TK W+H+D
Sbjct:  131 YVKTCN--KNPKKTKWWYHDD 149          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.008e-17
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  106 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDPVM 483
            +A  R+QKEL + Q +PPA      V D+L  W   + G P + Y    F L V FP  YP + P++ F      HP+I SNG ICLDIL   WSPA+TVS V +SI S+L        P  +DP++
Sbjct:    1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCD------PNPDDPLV 120          
BLAST of EY691982 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.008e-17
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  106 IASNRLQKELVEWQVNPPAGFKH-KVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPADNDPVM 483
            +A  R+QKEL + Q +PPA      V D+L  W   + G P + Y    F L V FP  YP + P++ F      HP+I SNG ICLDIL   WSPA+TVS V +SI S+L        P  +DP++
Sbjct:    1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKI-YHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCD------PNPDDPLV 120          
The following BLAST results are available for this feature:
BLAST of EY691982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
UBC16_ARATH8.451e-7789.05Probable ubiquitin carrier protein E2 16 OS=Arabid... [more]
UBC18_ARATH1.438e-7688.32Probable ubiquitin carrier protein E2 18 OS=Arabid... [more]
UBC15_ARATH5.926e-7586.13Ubiquitin-conjugating enzyme 15 OS=Arabidopsis tha... [more]
UBC17_ARATH2.656e-6980.29Probable ubiquitin carrier protein E2 17 OS=Arabid... [more]
UBE2W_DICDI8.416e-3653.91Probable ubiquitin-conjugating enzyme E2 W OS=Dict... [more]
UBE2W_MOUSE3.674e-3352.46Probable ubiquitin-conjugating enzyme E2 W OS=Mus ... [more]
UBE2W_HUMAN4.785e-3352.46Probable ubiquitin-conjugating enzyme E2 W OS=Homo... [more]
UBE2W_DANRE1.377e-3252.46Probable ubiquitin-conjugating enzyme E2 W OS=Dani... [more]
UB2D1_MOUSE3.008e-1741.73Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]
UB2D1_HUMAN3.008e-1741.73Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691982 ID=EY691982; Name=EY691982; organism=Citrus sinensis; type=EST; length=1051bp
CGGACGCGTGGGCGGACGCGCCCCGGAAAATCCAGACGGTGCCGTTCTCT
TCTCGTGGAAGCCATGACCAGTTCATCTGCTCCTTCACGCAAGGCTTTAA
GCAAGATCGCAAGTAATAGACTGCAAAAAGAGCTTGTGGAGTGGCAAGTC
AATCCTCCAGCGGGATTCAAACACAAAGTCACTGATAATCTGCAAAGGTG
GATAATCGAAGTCAACGGAGCGCCGGGGACGCTCTATGCGAACGAAACGT
TTGAGCTTCAAGTGGATTTCCCTGAGCATTACCCTATGGAGGCACCTCAA
GTGATTTTTCTCCCTCCAGCTCCTCTGCATCCCCACATTTATAGCAATGG
ACATATCTGTTTAGATATTCTTTATGATTCCTGGTCCCCGGCAATGACTG
TTAGTTCTGTATGTATCAGCATTCTCTCCATGTTGTCAAGCTCAACTGTG
AAACAACGGCCCGCCGATAACGACCCGGTTATGTGAAGAACTGTAAGAAT
GGGAGAACTCCAAAGGAGACAAAAGGGTGGTTCCATGAAGATAAAGTGTA
ATGATAGAAGAAATTATTCAATTAAGCTGTAACCCTGTGTATAAAAATGG
AGGGGTTTTTGGGGAAAAAATTCGTGGAAAGGCATCAGGGAAAAAGGGGG
GGTGGCCAATTGCAAATGCCAATAAAAAAACCAGAGCCCCCGGGTTTTAT
AGGGTTTTTTCACTTGGCTTTAGATAACACAAGAAAGAGAATTTTTAAAT
TTTTGAGGGTTGGAAATGGCCCACCCCGGGAAAGCGGGTTTAACTGATAT
TTTAGAATGAAATATCCCAAATTAATTCAGAGACGAAAAAATAACATAAA
ATAGAAAACAAAGAACACTAAAATAAAAAGATAAAGAGACGGAAGTGGGA
GGCGATCGTCTTTATCACGAAAGACTTATTGACACTATAATGAACATACA
GCTTTACGATTGTATAGTAATTACATTTATAGCATGTGTGCTCTGGTTAA
TTTAGTAAAATGCATGGAACACCTGCATATTATTACTCTAATCATCATAC
A
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