EY691981

Overview
NameEY691981
Unique NameEY691981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY691981_ssr513 microsatellite EY691981_ssr513:513..527. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY691981 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 7.413e-14
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 1 
Query:  109 SNIIFSNGLRDPYSSGGVLENISDSVVAIPTINGSHCLDILGAKESSDPDWLVTQRETEIEIIEGWISKYYAD 327
            SNIIFSNG  DP+S GGV  +I+D++VAI   +G+H LD L A  + DP  ++  R  E++ ++ WI  +Y++
Sbjct:  418 SNIIFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLD-LRAHNAFDPSSVLLSRLLEVKHMKKWILDFYSN 489

HSP 2 Score: 37.7354 bits (86), Expect = 7.413e-14
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3 
Query:    9 FIDGCESLYGVSPRPHWVTTYYGGYKTDS 95
            + + C + +GV PRPHW+TT YGG    S
Sbjct:  388 YSNDCFNQWGVKPRPHWMTTMYGGKNISS 416
[Close]
BLAST of EY691981 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.622e-13
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 1 
Query:  109 SNIIFSNGLRDPYSSGGVLENISDSVVAIPTINGSHCLDILGAKESSDPDWLVTQRETEIEIIEGWISKYY 321
            +NIIFSNG  DP+S GGV ++I+D+++AI   NG+H LD L A  + DP  +   R  E++ ++ WIS +Y
Sbjct:  423 TNIIFSNGELDPWSGGGVTKDITDTLLAIVIPNGAHHLD-LRASNALDPVSVQLTRSLEVKYMKQWISDFY 492

HSP 2 Score: 33.8834 bits (76), Expect = 4.622e-13
Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 3 
Query:    9 FIDGCESLYGVSPRPHWVTTYYGGYKTDS 95
            + D C   +GV PRP W+ T YGG    S
Sbjct:  393 YSDDCFKQWGVRPRPSWIPTMYGGKNISS 421
The following BLAST results are available for this feature:
BLAST of EY691981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PCP_MOUSE7.413e-1443.84Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
PCP_BOVIN4.622e-1345.07Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-A09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691981 ID=EY691981; Name=EY691981; organism=Citrus sinensis; type=EST; length=1024bp
TGAGCAGCTTCATTGACGGGTGCGAGAGCTTGTATGGCGTCTCCCCGCGG
CCTCATTGGGTCACTACTTACTATGGAGGATATAAAACTGATTCTCCAAA
GATTTGCTAGCAACATTATTTTCTCCAATGGACTCAGAGATCCTTACAGC
AGTGGCGGAGTATTGGAGAACATATCAGATAGTGTCGTCGCCATTCCTAC
CATCAATGGCTCTCACTGCTTGGATATTCTTGGAGCCAAAGAAAGCAGTG
ATCCCGACTGGTTGGTCACGCAACGTGAGACTGAAATAGAGATCATTGAA
GGATGGATATCTAAGTACTATGCTGATCTCAAAGCAATCAAATAATTGAA
ACTGCTGTCAAAGGAAATAATTTATGACCCCCGCAGTCTCTATCATTTGA
GAAATAATAATCATCTGTTACCATATATGTATGGGTCCGCTTATAATAAA
GTGGCTGTATCGCTGTTGAAGTGGTTGTACAATTCATTTCCCGTACATTT
TTTCATGTATCCAATTAAATTAAATTAATTGGGACGAATAAACAGCCACA
ACATTAGGCCGAATTATTAATTTGCCAACTCCCCCATGGGCAACGGGGAA
GATCCATTTAGATTTTAGAAGAATGATTTCCGAACCCCTTCTAATATATA
ACTCCTTTTGGCCCCACTTTTTTTAAAAATATTTTTTTTGAGAGGGGGTT
ATTGGGTACCCTTTCTAATTTTCCTAATAAAAACCCTTTGGCCTATAGTA
CACCCTTATTAAAACCCCTTTTTGGTAAAAATAAAAAAAAAAGGGGGGGG
CCCGCCCCAAAAGGGAAATCAAAAGTTTTACTTTACCCTTTGCTTGGTGA
ATCTTAATGATCTCTTCTCTATAAGGCGCGATCTTAAATTTTATAATATT
CCTTGGGGGCGGCCTGTTTTTTCACACGCGTCCCGGGACGAGGGGGAAAT
AGCATCGGGGCGGGTTATACCTCCACTTTCATTTACCCCGCGCTTTGGTG
TGTATCAACTAACTCCCCCCCATT
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