EY691978

Overview
NameEY691978
Unique NameEY691978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.673e-67
Identity = 126/151 (83.44%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDI LANSVD+ SLRD Q+D+ RVKNPEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:  101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 251          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 8.184e-67
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+EDI LANSVD+ SLRD Q+D+ RVKNPEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:  101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 251          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.396e-66
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRD Q+D+ RVKNPEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:   91 DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 241          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.110e-66
Identity = 124/151 (82.12%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRD Q+D+ RVK+PEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:   69 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 219          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.110e-66
Identity = 124/151 (82.12%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRD Q+D+ RVK+PEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:  105 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 255          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 9.048e-66
Identity = 122/151 (80.79%), Postives = 134/151 (88.74%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+L+GGRF+YASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI+LANSVDVASLR  ++D+ RVKNPEWLVV+GVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:  106 DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFN 256          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.438e-65
Identity = 122/151 (80.79%), Postives = 133/151 (88.08%), Query Frame = 3
Query:    3 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            D SKRAFAYF+LTGGRFVYAS +RLLILKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT++DI+LANSVD+ +LRD Q+D+ RVKNPEWLVVVGVCTHLGCIP  N GDFGGW  PCHG H DIS  I  G +P N
Sbjct:   98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 248          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.219e-39
Identity = 77/152 (50.66%), Postives = 109/152 (71.71%), Query Frame = 3
Query:    3 DASK-RAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            DA K R++AYF++     + ++  +  +  F+ SM+A+ DVLA+A +EV+L++I  G  V VKW+GKPVFIR RT  +IQ ANSVD+++L+D Q D+ RVK+P+WL+++G+CTHLGC+P    GDFGGW  PCHG H DIS  I  G +P N
Sbjct:   48 DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLN 199          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.219e-39
Identity = 78/145 (53.79%), Postives = 103/145 (71.03%), Query Frame = 3
Query:   21 FAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            F+YF++     + A+  +  I +F+ +MSAS DVLA+A +EVDL++I  G  V +KWRGKPVFIR RT  +I+ AN V+VA+LRD + D+ RVK PEWLV++GVCTHLGC+P    GD+GGW  PCHG H DIS  I  G +P N
Sbjct:   70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLN 214          
BLAST of EY691978 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.583e-38
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 3
Query:   90 FVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDTQEDSVRVKNPEWLVVVGVCTHLGCIPCKNGGDFGGWINPCHG*HDDISEWIHIGTSPSN 455
            F+ S SAS DVLA++  EVDLS I  G  + VKW+GKPVFIR RT E+IQ ANSVD+++LRD Q DS RV+ PEWLV++GVCTHLGC+P    GD+GGW  PCHG H DIS  I  G +P N
Sbjct:   91 FLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLN 212          
The following BLAST results are available for this feature:
BLAST of EY691978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
UCRI3_TOBAC3.673e-6783.44Cytochrome b-c1 complex subunit Rieske-3, mitochon... [more]
UCRI5_TOBAC8.184e-6782.78Cytochrome b-c1 complex subunit Rieske-5, mitochon... [more]
UCRI1_TOBAC1.396e-6682.78Cytochrome b-c1 complex subunit Rieske-1, mitochon... [more]
UCRI4_TOBAC3.110e-6682.12Cytochrome b-c1 complex subunit Rieske-4, mitochon... [more]
UCRI2_TOBAC3.110e-6682.12Cytochrome b-c1 complex subunit Rieske-2, mitochon... [more]
UCRI_MAIZE9.048e-6680.79Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SOLTU3.438e-6580.79Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_YEAST7.219e-3950.66Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_NEUCR7.219e-3953.79Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SCHPO3.583e-3861.48Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-086-A06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691978 ID=EY691978; Name=EY691978; organism=Citrus sinensis; type=EST; length=970bp
GTGACGCCAGCAAGCGTGCATTTGCTTATTTTATCTTGACAGGTGGCAGG
TTTGTGTATGCCTCCTTAATTCGTCTTTTGATCCTCAAGTTTGTTCTTAG
CATGTCTGCGAGCAAAGATGTCCTTGCCCTTGCCTCCCTTGAGGTTGACC
TATCCAGCATTGAACCCGGGACTACTGTTACAGTCAAGTGGCGTGGGAAG
CCTGTTTTCATCAGGCGTCGGACTGAAGAGGATATTCAGTTGGCTAACAG
TGTTGATGTAGCGTCACTCCGGGACACGCAGGAAGATTCTGTCAGGGTTA
AGAATCCAGAATGGCTTGTCGTTGTTGGTGTGTGCACACATTTGGGGTGC
ATTCCATGTAAAAATGGTGGTGACTTTGGAGGTTGGATCAACCCCTGCCA
TGGATAGCACGATGACATATCTGAGTGGATACACATAGGGACATCACCTT
CAAATCAGTGGTACCGAATCAGCACTCATGGACGACAAAATATAAAGAAT
GGCTGCAAATACAAAATGGATACAATATAAAAACAACCACTAACGACGAG
AAAGGCTAACACCACCTACCCATACACTGTAGAACAAGCCTCAGAAGAAC
ATATTGTAAAGATAGCATGTGAAAATGCATCAACAATGCGTACATCAACC
AACTCACGAAAGCCTAACATAGAAGCGATTGCACAATAGAGTGACAGAAG
AAACCATAAACGCTAATCCGACCGCAGAACGCACCACCGGAACAAAACCA
ACAAGAGGGATAACTAGAACAATGACAGGACGACGACGAATCCCACACCG
ACTCATAAGCACAAACCACACCATGAGACTCAGAAACAACCAAACTGATG
GCAGACAAAGCAAAAGCCGAGAAGGAAAGCTACGCATAAGACAAATAAGA
AACAACACGACGAACGCAAAACTGTCTGGAATAACATAAAAAACTCAAGA
AAACGATGAGAAAGAAATTA
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