EY691970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV3_ARATH (Probable histone H2A variant 3 OS=Arabidopsis thaliana GN=At1g52740 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.200e-30 Identity = 70/102 (68.63%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 88 AKGLITGKTTIXXXXXXXXXXPVSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 AKGLI GK + P++RSSRAGLQFPVGRVHRLLK YTAAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEEL Sbjct: 6 AKGLIMGKPS-GSDKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEEL 106 HSP 2 Score: 29.261 bits (64), Expect = 2.200e-30 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLINK Sbjct: 110 IKGTIAGGGVIP-HIHKSLINK 130
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV3_ORYSJ (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica GN=Os03g0743400 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.851e-30 Identity = 69/103 (66.99%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 91 KGLITGKTTIXXXXXXXXXX--PVSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 KGL+ KTT PVSRSSRAGLQFPVGR+HR LK+ Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 7 KGLLAAKTTAAKSAEKDKGKKAPVSRSSRAGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 109 HSP 2 Score: 29.261 bits (64), Expect = 4.851e-30 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLINK Sbjct: 113 IKGTIAGGGVIP-HIHKSLINK 133
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV1_ORYSJ (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.071e-29 Identity = 69/104 (66.35%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 91 KGLITGKTTIXXXXXXXXXX---PVSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 KGL+ KTT PVSRSSRAGLQFPVGR+HR LK Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 7 KGLLAAKTTAAKSADKDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 110 HSP 2 Score: 29.261 bits (64), Expect = 1.071e-29 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLINK Sbjct: 114 IKGTIAGGGVIP-HIHKSLINK 134
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.395e-29 Identity = 69/105 (65.71%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 91 KGLITGKTTIXXXXXXXXXX----PVSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 KGL+ KTT PVSRSSRAG+QFPVGR+HR LK YTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 7 KGLLAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 111 HSP 2 Score: 29.261 bits (64), Expect = 1.395e-29 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLINK Sbjct: 115 IKGTIAGGGVIP-HIHKSLINK 135
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.810e-29 Identity = 66/102 (64.71%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 91 KGLITGKTTIXXXXXXXXXXP-VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 KGL+ KTT +SRSSRAG+QFPVGR+HR LK+ YTA+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 7 KGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 108 HSP 2 Score: 28.8758 bits (63), Expect = 6.810e-29 Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSL+NK Sbjct: 112 IKGTIAGGGVIP-HIHKSLVNK 132
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.867e-29 Identity = 65/102 (63.73%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 91 KGLITGKT-TIXXXXXXXXXXPVSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 KGL+ KT P+SRS+RAG+QFPVGR+HR LK YTA+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 7 KGLVAAKTMAANKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 108 HSP 2 Score: 29.261 bits (64), Expect = 8.867e-29 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLINK Sbjct: 112 IKGTIAGGGVIP-HIHKSLINK 132
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZL_XENTR (Histone H2A.Z-like OS=Xenopus tropicalis GN=h2a.zl PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 9.580e-28 Identity = 61/80 (76.25%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 ++RSSRAGLQFPVGR+HRLLK YTAAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEEL Sbjct: 18 ITRSSRAGLQFPVGRIHRLLKNRTTSHGRVGGTAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEEL 97 HSP 2 Score: 27.335 bits (59), Expect = 9.580e-28 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLI K Sbjct: 101 IKATIAGGGVIP-HIHKSLIGK 121
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZL_XENLA (Histone H2A.Z-like OS=Xenopus laevis GN=h2a.zl1 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 9.580e-28 Identity = 61/80 (76.25%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 ++RSSRAGLQFPVGR+HRLLK YTAAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEEL Sbjct: 18 ITRSSRAGLQFPVGRIHRLLKNRTTSHGRVGGTAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEEL 97 HSP 2 Score: 27.335 bits (59), Expect = 9.580e-28 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLI K Sbjct: 101 IKATIAGGGVIP-HIHKSLIGK 121
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV_DROME (Histone H2A.v OS=Drosophila melanogaster GN=His2Av PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.554e-27 Identity = 61/80 (76.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 VSRS+RAGLQFPVGR+HR LK Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 18 VSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 97 HSP 2 Score: 27.7202 bits (60), Expect = 3.554e-27 Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINKFLQKINSWTRHPSRIL 518 +K TIAGGGVIP + KSLI K + + R + IL Sbjct: 101 IKATIAGGGVIP-HIHKSLIGKKEETVQDPQRKGNVIL 137
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AV_STRPU (Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.681e-27 Identity = 61/80 (76.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393 VSRS+RAGLQFPVGR+HR LK Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL Sbjct: 15 VSRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 94 HSP 2 Score: 27.335 bits (59), Expect = 4.681e-27 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 405 LKETIAGGGVIPSYPTKSLINK 470 +K TIAGGGVIP + KSLI K Sbjct: 98 IKATIAGGGVIP-HIHKSLIGK 118 The following BLAST results are available for this feature:
BLAST of EY691970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >EY691970 ID=EY691970; Name=EY691970; organism=Citrus sinensis; type=EST; length=850bpback to top |