EY691920

Overview
NameEY691920
Unique NameEY691920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.448e-24
Identity = 52/130 (40.00%), Postives = 85/130 (65.38%), Query Frame = 1
Query:    1 LDFAGSIFGS---ETGFKTVTTKS--TSNTFQNYTILEVQEIPAS-KMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVF 372
            +DF  S FG+   +     V +K+  +S+  Q+YT+  V+ +  + +++ACH  SYPYA++ CH  +TE   + ++ SLVG +G   +A++ CH DTS WNP+H +F +LG+KPGT+PVCH+   D +V+
Sbjct:  454 VDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAGTGQLIACHPESYPYAVFMCH--LTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.602e-21
Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 1
Query:    1 LDFAGSIFGSETGFKTVTT----KSTSNTFQNYTILEVQEIPAS-KMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVF 372
            +DF  S  G+    K  +T    K      Q YT+   + +  + +++ACH  SYPYA++ CH  +TE   + ++ SLVG +G   +A++ CH DT++WNP H +FQ+LG+KPGT+PVCH+   D +V+
Sbjct:  196 VDFVASSLGTRD-IKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCH--LTE-ATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.568e-21
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 1
Query:    1 LDFAGSIFGSE--TGFKTVTTKSTSNTFQNYTILEVQEIPAS----KMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVF 372
            +DFA S  G+       TV  K  S   Q YT+  V+   A     ++VACH   Y YA++ CH        + + VS+ G +G   +A++ CH DT+ WNP H++FQ+L +KPGT+PVCH+ P DH+V+
Sbjct:  300 VDFATSSLGTSHVRAASTVVGKEGSPE-QEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACH---LTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20
Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 1
Query:    1 LDFAGSIFGSETGFKTVTTKSTSNT-FQNYTILE--VQEIPASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVF 372
            +DF+ S  G        T  +  N   Q Y I    V+++   K V CH   YP+A++ CH  M   +  V+ V L G+NG  A A++ CH +TS WNP+HL+F++L +KPGT+PVCH+ P  H+V+
Sbjct:  266 VDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAM---MTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19
Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   46 TVTTKSTSNTFQNYTILEVQEIPASKM-VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISA-CHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVFVPAAK 387
            T T        Q YT++ VQ +    + VACH  +YPY +Y CH   T   ++ + V + G  G  A  I+A CH DTS WNP+H+SF++LG KPG  PVCH  P  H+++    K
Sbjct:  246 TSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCH---TTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   46 TVTTKSTSNTFQNYTILEVQEIPASKM-VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG-DIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVF 372
            T T        Q YT+  V+ +    + VACH  +YPY +Y CH   T   ++ + V + G  G D     + CH DTS WNP+H+SF++LG KPG  PVCH  P  H+++
Sbjct:  273 TSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCH---TTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 380          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   79 QNYTILEVQEIPASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG-DIADAISA---CHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVFVPAAK 387
            Q Y +  V  +  +  VACH  +YPY +Y CH   T    + + V + GD G D  +A++    CH +TS+WNP+H+SF++LG KPG  PVCH  P  H+V+    K
Sbjct:  305 QAYAVRAVLPVEGAGFVACHDQAYPYTVYRCH---TTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVK 408          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.112e-14
Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 1
Query:    1 LDFAGSIFGSET--GFKTVTTKSTSNTFQNYTILEVQEIPAS--KMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYFPTDHLVFV 375
            ++FA S  G+       T   ++     Q Y +  V+ +P S   MVACH M+Y YA++GCH+         + V+L G +G  A+A++ACH D +    +  +++ LG+ PG++PVCH+ P D +++V
Sbjct:  115 VEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHT----TTAAAYTVTLAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWV 237          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.671e-13
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 1
Query:    1 LDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 348
            +DFA S+ G     +T  T++ + + +   I +V  I   K+   V+CH   YPY +Y CHS     + +   + L      I   I+ CH+DTS W P H +F  LG KPG I VCH+
Sbjct:  499 IDFATSVLGRSVVLRT--TENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLEL-NSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHW 614          
BLAST of EY691920 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12
Identity = 42/121 (34.71%), Postives = 61/121 (50.41%), Query Frame = 1
Query:    1 LDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIA--DAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 348
            +DFA S+ G     +T  T+ T  +  N  I  V+ I   K+   V+CH   YPY +Y CHS       +V+   ++  N  +     ++ CH+DTS W P H +F  LG  PG I VCH+
Sbjct:  503 IDFATSVLGRNVVVRT--TEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKV---RVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHW 618          
The following BLAST results are available for this feature:
BLAST of EY691920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BURPH_ORYSJ3.448e-2440.00BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP5_ORYSJ1.602e-2138.76BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP3_ORYSJ3.568e-2139.23BURP domain-containing protein 3 OS=Oryza sativa s... [more]
RD22_ARATH1.771e-2039.37Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
RAF1B_WHEAT7.439e-1940.52Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
RAF1A_WHEAT1.074e-1738.74Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ1.074e-1740.19BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP6_ORYSJ1.112e-1433.33BURP domain-containing protein 6 OS=Oryza sativa s... [more]
JP650_ARATH4.671e-1335.29Probable polygalacturonase non-catalytic subunit J... [more]
GP1_SOLLC2.318e-1234.71Polygalacturonase-1 non-catalytic subunit beta OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-C04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691920 ID=EY691920; Name=EY691920; organism=Citrus sinensis; type=EST; length=899bp
CTTGATTTTGCTGGCAGCATCTTTGGCTCGGAGACAGGTTTTAAAACTGT
GACCACAAAGTCTACCAGTAATACTTTCCAAAATTATACAATCCTAGAGG
TGCAAGAGATCCCTGCTTCCAAGATGGTAGCTTGTCATTACATGTCCTAT
CCTTATGCAATTTACGGCTGCCATAGCCATATGACAGAGAACATCAACAA
AGTATTCAGGGTTTCTCTGGTCGGTGACAATGGAGATATAGCTGACGCTA
TTTCAGCTTGTCATCTGGATACCTCTCAGTGGAATCCTGACCATCTATCA
TTTCAGATACTTGGTATTAAGCCGGGAACTATCCCCGTCTGCCACTACTT
CCCAACAGATCATCTTGTCTTCGTTCCAGCAGCTAAAGATGAGTTTATGT
AATGTCTGATTGTATTCAGCCTAGTAATGTTTGGTGTCAGTAATGTTTAA
GAGGCTTTGTTTGTGTATTGTATTCAGCCTAGTAATGTTTGGTGTCAGTA
AATGTTTAAGAGGCTTTGGTTTGTGTATTGTATTCAGCCTAACTTGAAAG
AATAATGTGGGCTGGTTTATTAAAATATGTACCGAGTTTTTCCTCCCTCA
AAATAAATTTTGATGGTTTGTAAATTAAAAAAAAAAAAAAAAAGGGGGGG
GCCGCTCTTAAGGGAATCCAAAGCTTAACTAACGCCGGCATGGCGACGTC
CATAGCCCTCTTCAAAGGGGCCCCCCAAAATTTCAATTCACCTGGCCCGC
CTTTTTAAAACCGCGGGAAGGGGAAAAACCCCTGGGGTTTCCCCAAATTA
AATCCCCCTTTACGCACACACCCCCCCCTTTGCCCCCCCGGGGGGTAAAA
AAAAAGAAAAAGACCCCCCCCCCCATTCCCCCCCTCTCCCCATAATGTT
back to top