EY690947

Overview
NameEY690947
Unique NameEY690947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAS1 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=odhB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD V+  E I ++ETDKV ++V S EAGV++EL+A EG+TVE G  IAV+   GEG
Sbjct:    6 VPELAESITEGTIAEWLKQVGDSVDKGEAIVELETDKVNVEVVSEEAGVLQELLANEGDTVEVGQAIAVV---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_MYCTU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium tuberculosis GN=sucB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVI---SKSGEGVA 602
            +P +GES+T+GT+ ++LK  GD VELDEP+ ++ TDKV  ++ SP AGV+ +++A+E +TVE G ++AVI     +GE  A
Sbjct:    7 MPALGESVTEGTVTRWLKQEGDTVELDEPLVEVSTDKVDTEIPSPAAGVLTKIIAQEDDTVEVGGELAVIGDAKDAGEAAA 87          

HSP 2 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  345 GGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 593
            GGD    ++P +GES+T+GT+ ++LK  GD V++DEP+ ++ TDKV  ++ SP AGV+  + A E  TV  G ++A I  + +
Sbjct:  118 GGDAKPVLMPELGESVTEGTVIRWLKKIGDSVQVDEPLVEVSTDKVDTEIPSPVAGVLVSISADEDATVPVGGELARIGVAAD 200          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_MYCBO (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium bovis GN=sucB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVI---SKSGEGVA 602
            +P +GES+T+GT+ ++LK  GD VELDEP+ ++ TDKV  ++ SP AGV+ +++A+E +TVE G ++AVI     +GE  A
Sbjct:    7 MPALGESVTEGTVTRWLKQEGDTVELDEPLVEVSTDKVDTEIPSPAAGVLTKIIAQEDDTVEVGGELAVIGDAKDAGEAAA 87          

HSP 2 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  345 GGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 593
            GGD    ++P +GES+T+GT+ ++LK  GD V++DEP+ ++ TDKV  ++ SP AGV+  + A E  TV  G ++A I  + +
Sbjct:  118 GGDAKPVLMPELGESVTEGTVIRWLKKIGDSVQVDEPLVEVSTDKVDTEIPSPVAGVLVSISADEDATVPVGGELARIGVAAD 200          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IAVI   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAVI---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAES (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 3
Query:  354 LVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            + +  VP + ESIT+GT+A++LK  GD V+  E I ++ETDKV ++V S EAGV+ E +A+EG+TVE G  +AV+   GEG
Sbjct:    1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEGDTVEVGQAVAVV---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAEQ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 3
Query:  354 LVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            + +  VP + ESIT+GT+A++LK  GD V+  E I ++ETDKV ++V S EAGV+ E +A+EG+TVE G  +AV+   GEG
Sbjct:    1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEGDTVEVGQAVAVV---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAW (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MW2) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAS (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IAVI   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAVI---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=odhB PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
The following BLAST results are available for this feature:
BLAST of EY690947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ODO2_STAS16.197e-1555.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MYCTU8.093e-1546.91Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MYCBO8.093e-1546.91Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAB1.057e-1456.58Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAES1.380e-1449.38Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAEQ1.380e-1449.38Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAW1.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAS1.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAR1.380e-1456.58Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAN1.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690947 ID=EY690947; Name=EY690947; organism=Citrus sinensis; type=EST; length=873bp
AGACTCTCTCAAGAAAACGCAACTTGTTCTGTTCGATCAAGCAGGTACAT
ACCTGAACAACGATGCTGGGTGTTATACGGAGAAGGGTCGCGAGTGGAGG
CTCGCCTGCTTCGATTTTAGGGCATTCACTGCAGACAATGAGGCCTGCAA
TGTCTGTATCTAGAGTCTCATCTATTGCAGGAAAAGAGACGTTACTGCAT
TCAAGAGGATTAGGGCATATCCGGAATTTCAGTCATTTAATTTTTCCAGG
TTGCTCTAAGGGTTGTCAACCATTAAGGGATGTAATTTCTAGCACCCAGA
AAGCAACTAACATGTATCTGTGGAGCCATCCATTTTCTTCTGAAGGAGGG
GATTTGGTTGATGCTGTTGTCCCTTTTATGGGTGAATCCATAACCGATGG
TACTTTGGCAAAATTCTTGAAGGGTCCTGGTGATAGGGTGGAACTTGATG
AACCAATTGCTCAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGT
CCGGAAGCAGGTGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGT
GGAACCAGGTACCAAGATTGCTGTGATTTCAAAGTCTGGGGAAGGTGTAG
CTCATGTACCTCCCTCAAAAAAAATACCAGAAAAAGCTGCTCCTAAACCC
CCTTCTGCTGAAAAAGCAAAGGAGGAAAAGCCGCACCCTAAAGTTGAAAC
TTGTTCTGAGAAACAAAAACACCCTCTCACCCCCCTCTAACCGCCCTGGT
TACTGAACCCTCCCTTCCCCCCAAGGGAAAGGGAAAAAAAATTTCTTATG
ACACAACTTACCAAACCGACTTGCAACCCGAATTGAAAAATCCCCCAAAA
AAAATTTGGGAATGGTGGACTCC
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