EY690151

Overview
NameEY690151
Unique NameEY690151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY690151 vs. ExPASy Swiss-Prot
Match: DRG2_DICDI (Developmentally-regulated GTP-binding protein 2 homolog OS=Dictyostelium discoideum GN=drg2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.497e-13
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 2 
Query:   14 LIPVIEGNRKYMKCVYVYNKXXXXXXXXXXKLTRQPDSVFISCNLKMNLNILLARMWY*ILLVTDYTNSLRTPP*F 241
            LI  IEG R Y++C+YVYNK          +L+RQP+SV ISCN+ +NL+ LL ++W  + LV  YT      P F
Sbjct:  228 LIDAIEGRRSYIRCLYVYNKMDHMSMEDVDRLSRQPNSVVISCNMNLNLDFLLDKIWDYLNLVRVYTKLRGASPDF 303

HSP 2 Score: 26.1794 bits (56), Expect = 8.497e-13
Identity = 13/35 (37.14%), Postives = 18/35 (51.43%), Query Frame = 3 
Query:  234 PDFSVSVCLSDDRGGCTMDDFCILIPTSLVKDLHY 338
            PDF+ ++ L   R G TM+D C  +   LV    Y
Sbjct:  301 PDFNDAIIL---REGATMEDICRFLHKELVSQFKY 332
The following BLAST results are available for this feature:
BLAST of EY690151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRG2_DICDI8.497e-1344.74Developmentally-regulated GTP-binding protein 2 ho... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-058-B02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690151 ID=EY690151; Name=EY690151; organism=Citrus sinensis; type=EST; length=871bp
CGGACGCGTGGGTTTGATACCTGTCATTGAAGGAAACCGTAAATACATGA
AGTGTGTATATGTTTACAATAAGATAGATGTTATTGGTATTGATGACGTG
GATAAGTTAACCCGCCAGCCAGATTCTGTCTTTATTAGCTGCAATCTGAA
GATGAACTTAAACATACTGCTTGCAAGGATGTGGTATTAGATATTACTTG
TGACAGATTATACCAACTCTCTTCGTACACCACCCTGATTTCTCTGTTTC
TGTATGTCTATCTGATGATAGAGGTGGATGCACAATGGATGACTTCTGTA
TTCTCATACCCACGAGTTTGGTGAAGGACCTCCACTATGTGCTAAACCCG
CCCACCAATGCAACGCCCTACTCCAAACACACCCACCACCGCCCTACGCG
CAGCAATGAACACCCCACGCCACCCACCCCAAGCCCCCGACGGAAGAGAC
GGCAAGAACAACAGAAGACACCAACATACCCTACAACACGACCCTCCGAC
CCCCCGACCCACCCCCCACCCCCCCCCCCCCGTCCCCCCCCACCCCCCCC
CACCCGCCCCCTCGCCCCCGCCCACGCAGCCGCGCAACACCCACAACACC
CCCGGACGCCCGCGCCGCACACCGAGGCCACCACCCCCCCACCCAGACCA
ACCCAGCCCGACGCACCACACCCCCCCAAACAACAAAACGAGACGCGACA
CACAAAAACGCATACAGCAGCACGACCCGCAGCGCACGCAACAGCAGCCA
CAACAACACCACCGCCGCACGCCCCCCCCGACCGCACCAGACCCACACCC
ACCGACACAGCGCCCTCGCCCAGCCCCACGACCAGGCCACCCCACCGCCC
CGACACTCCCCCGCCACCCAC
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