EY690125

Overview
NameEY690125
Unique NameEY690125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 7.477e-60
Identity = 106/144 (73.61%), Postives = 124/144 (86.11%), Query Frame = 3
Query:    9 MASVSSPMASQLKSSFTSP-VSRSLLTPRGISGSPFGVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            MA+ +SPMASQL+SSF+S  +S+ L  P+GISG+PFGV P+KR   F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPF KAGPL+NT  AG  GSLAA GLVV
Sbjct:    1 MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVV 144          

HSP 2 Score: 40.0466 bits (92), Expect = 7.477e-60
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  442 ISICLTIYEIAYFREGKASTAPGLTLTIKEK 534
            +S+CLTIY I+ F+EG+ S AP LTLT ++K
Sbjct:  146 LSMCLTIYGISSFKEGEPSIAPSLTLTGRKK 176          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.271e-59
Identity = 103/143 (72.03%), Postives = 123/143 (86.01%), Query Frame = 3
Query:    9 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFGVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            MA+ +SP ASQL SSF S  +R+L++P+G+S SP   +P+ R+  F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPF KAGPL+NT  AG  GSLAAGGL+V
Sbjct:    1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIV 142          

HSP 2 Score: 42.3578 bits (98), Expect = 1.271e-59
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 1
Query:  430 LL*TISICLTIYEIAYFREGKASTAPGLTLTIKEK 534
            L+  +S+CLT+Y +A F EG+ STAP LTLT ++K
Sbjct:  140 LIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKK 174          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 8.864e-58
Identity = 106/144 (73.61%), Postives = 121/144 (84.03%), Query Frame = 3
Query:    9 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFGVVPS-KRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            MA+ +SPMASQLKS FT+   ++L+ P+GISG      PS +R   F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPF KAGPL+NTE AG  GSLAA GLVV
Sbjct:    1 MAATTSPMASQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVV 141          

HSP 2 Score: 40.0466 bits (92), Expect = 8.864e-58
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  442 ISICLTIYEIAYFREGKASTAPGLTLTIKEK 534
            +S+CLT+Y IA F+EG+ S AP LTLT ++K
Sbjct:  143 LSMCLTMYGIASFKEGEPSIAPALTLTGRKK 173          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.829e-44
Identity = 90/136 (66.18%), Postives = 106/136 (77.94%), Query Frame = 3
Query:   27 PMASQLKSSFTSPVSRSLLTPRGISGSPFGVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            PMASQ+  S       +   PRG+SG+        R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF   GPL+NT + G  G+L A GLV
Sbjct:    8 PMASQVMKS-----GLACSKPRGMSGASL-----TRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLV 133          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.307e-22
Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 3
Query:  189 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            IQ  N DPF+G+L TP+++S      L+NLPAYR  +SPLLRG+E+G+AHG+ LVGPFDK GPL+NT++A   G L+A GL++
Sbjct:    5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLII 87          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.253e-21
Identity = 43/83 (51.81%), Postives = 63/83 (75.90%), Query Frame = 3
Query:  189 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            I+P   +PF+G+L TP+ SS +  WYL NLP YR  +SPLLRG+E+G+AHG+ ++GPF K GPL+NT+++   G +AA GL++
Sbjct:    5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLII 87          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.637e-21
Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 3
Query:  183 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            Q ++P N DPF+G+L TPIT+S      LSNLPAYR  +SPLLRG+E+G+ HG+ LVGPF K GPL+N+E+A   G  +A GL++
Sbjct:    3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLII 87          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 3
Query:  183 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            + I+P N DPF+G+L TP+++S      L NLPAYR  +SPLLRG+E+G+AHG+ L+GPFDK GPL+ T++A   G L++ GL++
Sbjct:    3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLII 87          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_NOSP7 (Photosystem I reaction center subunit XI OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psaL PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.123e-21
Identity = 48/95 (50.53%), Postives = 67/95 (70.53%), Query Frame = 3
Query:  153 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            K + S+    +V+ P   DP +G+LETP+ +SPL  W+++NLPAYR  +SP  RG+EVG+AHG+ + GPF K GPL++T+ A   G LAA GLVV
Sbjct:    9 KNLPSDPRNREVVFPAFRDPQLGNLETPVNASPLSKWFINNLPAYRPGLSPARRGLEVGMAHGYWIFGPFAKLGPLRDTDNANLAGLLAAIGLVV 103          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.123e-21
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  189 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            I+P N DPF+G L TPI SS L   YLS LP YR  VSP LRG+E+G+AHG+ L+GPF + GPL+NT+I    G L+A GL+V
Sbjct:    5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIV 87          
The following BLAST results are available for this feature:
BLAST of EY690125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_ARATH7.477e-6073.61Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_CUCSA1.271e-5972.03Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_SPIOL8.864e-5873.61Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_HORVU6.829e-4466.18Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_GRATL4.307e-2256.63Photosystem I reaction center subunit XI OS=Gracil... [more]
PSAL_CYACA1.253e-2151.81Photosystem I reaction center subunit XI OS=Cyanid... [more]
PSAL_GUITH1.637e-2155.29Photosystem I reaction center subunit XI OS=Guilla... [more]
PSAL_PORPU3.646e-2151.76Photosystem I reaction center subunit XI OS=Porphy... [more]
PSAL_NOSP78.123e-2150.53Photosystem I reaction center subunit XI OS=Nostoc... [more]
PSAL_CYAME8.123e-2157.83Photosystem I reaction center subunit XI OS=Cyanid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690125 ID=EY690125; Name=EY690125; organism=Citrus sinensis; type=EST; length=771bp
CAATTCAAATGGCTTCTGTTTCTTCTCCAATGGCCAGCCAGCTCAAGAGT
AGCTTTACTTCACCAGTTTCCAGGAGCCTGCTTACTCCAAGGGGTATCTC
TGGATCTCCATTCGGGGTTGTTCCCTCCAAGAGAAGCCCTCGTTTCCTTG
TCAAAGCTATCCAATCTGAAAAGCCAACTTACCAAGTTATTCAGCCAATC
AATGGTGATCCATTCATTGGAAGCTTGGAGACTCCAATTACATCAAGTCC
ATTGATTGCATGGTACCTCTCAAATCTACCAGCTTATCGGACGGCAGTCA
GCCCACTACTGAGAGGAGTAGAGGTGGGGTTGGCCCATGGATTCCTCCTT
GTGGGTCCATTTGATAAGGCAGGGCCATTGAAAAACACTGAAATAGCAGG
ACCAGAAGGGTCATTGGCAGCTGGTGGACTTGTTGTGAACCATCAGCATT
TGCTTGACTATCTATGAGATTGCTTACTTCCGTGAAGGAAAAGCCTCCAC
TGCTCCAGGTTTAACATTGACCATTAAGGAAAAAGGACGTTGATCAATTG
CCACTATCTGATGGAGTGGGCTAAGTGCACTGGGAGGATTCTTCTTTGGT
GGGAATTTCTGCCGCCCCTTGCCCTCACTATCCTGCCTTTCCGCCCGTAA
CCATCCACACATACGGGCGCTTGGATATATGACAAATCAAACCCATAGGC
TTAAGAAACCAATGACGCCACACGGTGCAAACCCTGCCGGCAGACCTAGT
CTACGCCTGGTTATCGGGACA
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