EY690124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.237e-26 Identity = 64/110 (58.18%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 219 SKTPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS-------XXXXXXXXXXXXXXXXXPRKTRSVTAAAK 527 +K +HPPYFQMI EAL AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ASYKLS PR TR+ AAK Sbjct: 44 AKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLPKADSKKKPRSTRATATAAK 153 HSP 2 Score: 21.9422 bits (45), Expect = 1.237e-26 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 586 TCCQTKQPQSIKSP 627 T + KQP+SIKSP Sbjct: 179 TPAKAKQPKSIKSP 192
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 7.267e-18 Identity = 41/72 (56.94%), Postives = 59/72 (81.94%), Query Frame = 3 Query: 225 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 440 +P+H PY +M++EA+T+L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ SYKLS Sbjct: 47 SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 118
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17 Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 3 Query: 225 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 440 TP+HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++ SYKL+ Sbjct: 52 TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLA 123
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.338e-16 Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 216 QSKTPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 437 +S TP+HPPYF+MI +A+ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ SYKL Sbjct: 50 RSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15 Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 3 Query: 225 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 437 T SHP +F+MI++A++ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ S+KL Sbjct: 48 TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.188e-14 Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 231 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 440 SHP Y +MI +A+ +L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++ S+KLS Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 231 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLSXXXXXXXXXXXXXXXXXPRKTRSVTAA 521 SHP Y +MI +A+ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++AS+KL P K + T A Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVA 156
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 225 TPSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 437 T SHP Y +MI +A+ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++AS+K+ Sbjct: 59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
BLAST of EY690124 vs. ExPASy Swiss-Prot
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 228 PSHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKH-KDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 440 P+HPPY QM+T+A+ +L+++ GSS A+ K++E K+ KD F K L++ LK F G L+K++ SYKLS Sbjct: 23 PTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLS 94 The following BLAST results are available for this feature:
BLAST of EY690124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY690124 ID=EY690124; Name=EY690124; organism=Citrus sinensis; type=EST; length=830bpback to top |