EY690123

Overview
NameEY690123
Unique NameEY690123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY690123_ssr405 microsatellite EY690123_ssr405:405..416. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31
Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFEDYKKNENKEVAVN+FLPA DA N+++ SM+LY  YI+ESLR+
Sbjct:  138 DKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31
Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPEYRH+ DIKE+PPHRL EIRRFFEDYKKNENKEVAVN+FLPA DA N+++ SM+LY  YI+ESLR+
Sbjct:  138 DKIIAVCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAINAIKYSMDLYGAYIIESLRK 214          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31
Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPEYRHY DIK+LPPHRLAEIRRFFEDYKKNENK+VAV+DFLP + A N++Q SM+LYA+YI+ SLR+
Sbjct:  135 DKIIAVCADDPEYRHYTDIKQLPPHRLAEIRRFFEDYKKNENKDVAVDDFLPPNSAVNAIQYSMDLYAEYILHSLRK 211          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_MAIZE (Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPEYRHYNDI EL PHRL EI+RFFEDYKKNENKEVAV+ FLPA+ A  ++Q SM+LYA YI++SLR+
Sbjct:  138 DKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPATTAREAIQYSMDLYAQYILQSLRQ 214          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR2_ARATH (Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27
Identity = 57/77 (74.03%), Postives = 65/77 (84.42%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPE+RHY DIKELPPHRLAEIRRFFEDYKKNENK+V V  FLPA  A ++++ SM+LYA YI   L+R
Sbjct:  142 DKIIAVCADDPEFRHYRDIKELPPHRLAEIRRFFEDYKKNENKKVDVEAFLPAQAAIDAIKDSMDLYAAYIKAGLQR 218          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR2_CHLRE (Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIV 217
            DK+IAV ADDPEY+ + DI +LPPHRLAEI+RFFEDYKKNE+KEV V+DFL A +A   V+ S+N+Y ++ V
Sbjct:  112 DKLIAVHADDPEYKGFTDISQLPPHRLAEIKRFFEDYKKNEHKEVVVDDFLGAEEAKKVVKDSLNMYQEHYV 183          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLYADYIVESLRR 232
            DKIIAVCADDPEYRHY+    L P RL EI+R  EDYKKNENKEVAV+ FLPA+ A  ++Q SM+LYA YI++SLR+
Sbjct:  141 DKIIAVCADDPEYRHYSTSVSLLP-RLQEIKRL-EDYKKNENKEVAVDAFLPATTAREAIQYSMDLYAQYILQSLRQ 215          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIN (Inorganic pyrophosphatase OS=Leptospira interrogans GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 202
            DKIIAV A+D    H NDI ELPPH   E++ FFEDYKK ENK V + +F  A  A   V  S+ LY
Sbjct:  105 DKIIAVAANDMSVNHINDISELPPHFTLELKHFFEDYKKLENKTVVIEEFQNAILARKIVLDSLELY 171          
BLAST of EY690123 vs. ExPASy Swiss-Prot
Match: IPYR_LEPIC (Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ppa PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 2
Query:    2 DKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSMNLY 202
            DKIIAV A+D    H NDI ELPPH   E++ FFEDYKK ENK V + +F  A  A   V  S+ LY
Sbjct:  105 DKIIAVAANDMSVNHINDISELPPHFTLELKHFFEDYKKLENKTVVIEEFQNAILARKIVLDSLELY 171          
The following BLAST results are available for this feature:
BLAST of EY690123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IPYR_ORYSJ5.055e-3179.22Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI5.055e-3179.22Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_SOLTU6.602e-3179.22Soluble inorganic pyrophosphatase OS=Solanum tuber... [more]
IPYR_MAIZE1.798e-2876.62Soluble inorganic pyrophosphatase OS=Zea mays GN=I... [more]
IPYR2_ARATH9.865e-2774.03Soluble inorganic pyrophosphatase 2 OS=Arabidopsis... [more]
IPYR2_CHLRE8.089e-2163.89Soluble inorganic pyrophosphatase 2 OS=Chlamydomon... [more]
IPYR_HORVD3.074e-2067.53Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR_LEPIN6.864e-1253.73Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
IPYR_LEPIC6.864e-1253.73Inorganic pyrophosphatase OS=Leptospira interrogan... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-F09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690123 ID=EY690123; Name=EY690123; organism=Citrus sinensis; type=EST; length=772bp
TGATAAGATCATTGCTGTCTGTGCTGATGATCCCGAGTACCGACACTACA
ATGACATTAAGGAGCTTCCACCACATCGTTTGGCTGAGATCCGCCGCTTC
TTTGAAGACTACAAGAAAAATGAGAACAAGGAAGTTGCTGTAAATGACTT
TCTGCCAGCCTCTGATGCCTATAATTCAGTCCAGCAGTCTATGAACCTCT
ATGCTGACTATATTGTGGAGAGCTTGAGGCGGTAGTCGTTTGATCACCTG
AGTGATAGATTCGGTCGTGTGATGTTTCATACAGATATGGTGTTGTTACA
TATACAAGTCCTTTTATCATTACAAGAAACTCTATTTCTCCTTGCATGCA
CGCACAATGTTTCTTCAAATGCGTGCCTATATAGTGCATTTTCTTGGTTA
ATTGACTACTACTACTACGCCCGTGAAACTGGATGATGGTATATGATGGC
GATAATTTTGAACAAGTCTCACCTGTAATGTTTCTCTCTTTTATTATATG
CTGAAAGATACATTTTTGTCATTTTTTTGTTTGTCTATTGGCTTGGATGC
TGAGACTGAGCTCGGATATTTACACCGGCGCCCAGAAAGATGGATAAAGA
ATGCGGAAAAACCAGCANACTGACAATTTAATTTTTTTTTTGAGACATAA
GAAAGGAAAATTGGGCTAATTCTAGCGTTGCGACATCAAACTAAATCACG
CCAGCCCCCCGCCCGCCCCACGCCAACGCCAAACAAGCATGCCGATGCAA
CCACCGACGGCAGCATAAGAAA
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