EY690072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY690072 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.182e-44 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 345 QRENMTKRSLPEHNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 566 QREN+ K+ LPE NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FFG Sbjct: 87 QRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG 160 HSP 2 Score: 61.6178 bits (148), Expect = 3.182e-44 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 152 SPSTISFQGLEPLNTIARTS-LP*LATSDKKNSFGCIIGELSTPLVINLITDLSLLLGRFVFFNFTK 349 +P++ISF GL PL +S LP L+T+ +K+S + ELS +VI+L T LSL LGRFVFFNF + Sbjct: 22 NPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQR 88
BLAST of EY690072 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.365e-38 Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 345 QRENMTKRSLPEHNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 563 QRENM K+ +PE NG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF Sbjct: 96 QRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167 HSP 2 Score: 49.2914 bits (116), Expect = 1.365e-38 Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 2 Query: 167 SFQGLEPL--NTIARTSLP*LATSDKKNSFGCIIGELSTPLVINLITDLSLLLGRFVFFNFTK 349 SF GL PL N + S L+ S + S C ELS LVI+L T LSL LGRFVFFNF + Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMTCR-AELSPSLVISLSTGLSLFLGRFVFFNFQR 97
BLAST of EY690072 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.673e-32 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 3 Query: 345 QRENMTKRSLPEHNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 566 QREN+ K+ +PE NG THFEAGD RAKE+ +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FFG Sbjct: 71 QRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTSNGYDPPFFG 143 HSP 2 Score: 35.039 bits (79), Expect = 1.673e-32 Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 269 LSTPLVINLITDLSLLLGRFVFFNFTK 349 L +VI+L T LSL++GRFVFFNF + Sbjct: 46 LEPSVVISLSTGLSLVMGRFVFFNFQR 72
BLAST of EY690072 vs. ExPASy Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.485e-14 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 345 QRENMTKRSLPEHNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 551 QR +++ LPE NGV + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+ Sbjct: 41 QRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109 HSP 2 Score: 23.483 bits (49), Expect = 4.485e-14 Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 2 Query: 272 STPLVINLITDLSLLLGRFVFFNFTK 349 +T +I+ T L LGRFVF F + Sbjct: 17 NTSFIISASTAALLALGRFVFLPFQR 42 The following BLAST results are available for this feature:
BLAST of EY690072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY690072 ID=EY690072; Name=EY690072; organism=Citrus sinensis; type=EST; length=696bpback to top |