EY728498

Overview
NameEY728498
Unique NameEY728498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728498 vs. ExPASy Swiss-Prot
Match: FOLB_SHIFL (Dihydroneopterin aldolase OS=Shigella flexneri GN=folB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLAEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE +AE+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728498 vs. ExPASy Swiss-Prot
Match: FOLB_ECOLI (Dihydroneopterin aldolase OS=Escherichia coli (strain K12) GN=folB PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLAEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE +AE+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728498 vs. ExPASy Swiss-Prot
Match: FOLB_ECOL6 (Dihydroneopterin aldolase OS=Escherichia coli O6 GN=folB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLAEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE +AE+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728498 vs. ExPASy Swiss-Prot
Match: FOLB_HAEIN (Dihydroneopterin aldolase OS=Haemophilus influenzae GN=folB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = 1
Query:    7 IGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLAEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERGC 312
            IG YDWE+ I+Q L  DL  AWD +                VS  I  + E   F L+E  A  +A++L S +Q+  L +KL+KP AV  A+ VGV I RGC
Sbjct:   15 IGVYDWEQQIKQKLVFDLEMAWDCKQAAETDDVVYCLNYAEVSQAIIDYVESKPFLLIERVAYEVADLLESRYQLQGLKIKLSKPKAVAQARNVGVLIVRGC 116          
The following BLAST results are available for this feature:
BLAST of EY728498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
FOLB_SHIFL1.262e-1743.69Dihydroneopterin aldolase OS=Shigella flexneri GN=... [more]
FOLB_ECOLI1.262e-1743.69Dihydroneopterin aldolase OS=Escherichia coli (str... [more]
FOLB_ECOL61.262e-1743.69Dihydroneopterin aldolase OS=Escherichia coli O6 G... [more]
FOLB_HAEIN9.361e-1340.20Dihydroneopterin aldolase OS=Haemophilus influenza... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-F03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728498 ID=EY728498; Name=EY728498; organism=Citrus sinensis; type=EST; length=717bp
ACCGTGATCGGGGCCTACGACTGGGAGCGCGGTATCCGGCAGTGCCTGCG
TCTGGACCTGAGCTTCGCCTGGGATAATCGCCCGGCCGCCGCCGGTGATG
ACCTGACGCTGGCGCTGGATTACGCCAGCGTGTCCGCGCGCATCCAGGCC
TTTGCCGAGCAGGCGCAGTTCCAGCTGGTGGAAACCTTCGCCGAGCGCCT
GGCTGAAGTGTTGATGAGTGAATTCCAGATTCCCTGGCTGCACCTCAAGC
TGACCAAGCCTGGCGCCGTTCCGGCTGCCAAGGGCGTGGGCGTGGAGATC
GAGCGCGGATGTCGCTAACTCAGGTTTACCTTGGTCTTGGCAGCAATATC
GAGCGTGAGGCCCATTTACGCGCTGGCCTCGATGCGCTGGCGGATTTCCT
GACGGATCTGCGCTGTTCGCCGGTGTTTGAAAGCCAGCCGGTGGGCATCA
AGAGCGGGCCGTTCTTCAATCTGGTGGTGTCGGCCTATACCGACCTGCCG
TTGATGGAGCTGGACCGCCGACTGAAATTCATCGAGGCCGACAATGGCCG
CTACGCCCCGGATCGCAAGGGCTTGCCGCTGGACATCGACGTGCTGCTGT
ATGGCGAATTGGTGGGGTACTTCGATGGCCTGATTCTGCCCCGGGCCGAA
ATCCTGAAGAACGCGTTTGTGCTGTGGCCGCTGTCGTTGATGGCGATTGT
CGACAGAATGCGCTGGA
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