EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11474 contig Csv1_Contig11474:498..1336. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.093e-53
Identity = 100/172 (58.14%), Postives = 132/172 (76.74%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            C++PK C++LL GASKD+LNE+ERNL DA+ VARN++ NPKL+PGGGA ++ ++  L + S  I G+Q+WP+++ A A + IPRTLAQNCG +V++ MT L+ KHAN  E  + GIDGNTG I DM+E  +WD  +VK QT KT+IEA CMLLRIDDIVSGIKK +  G+ Q
Sbjct:  368 CENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVSGIKKDKRGGAGQ 539          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.978e-51
Identity = 95/163 (58.28%), Postives = 126/163 (77.30%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 493
            CK+PK CT+LL G SKD++NEVERNLQDAM+VARN+  +PKL PGGGAT++ VS  L +K+ SI G+ +WPY + A A + IPRTL QNCG N I+ +T L+ KHA G++++ GIDG TG + DM E  +W+   VK Q+ KTAIE+AC+LLR+DDIVSG++K
Sbjct:  364 CKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSF-GIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVRK 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.478e-50
Identity = 96/185 (51.89%), Postives = 133/185 (71.89%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEAD 553
            DCKDPK CT++L GASK++L EVERNLQDAM V RN++ +P L+PGGGA++++V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH   G   W G+DG  G ++DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK     RQ  + P+   +A+
Sbjct:  364 DCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTW-GVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGHKKKGEDHGRQPAAAPEAPQQAE 547          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.521e-50
Identity = 91/166 (54.82%), Postives = 132/166 (79.52%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 499
            +C++P+ C+++L GASKD+LNE+ERNL D ++VA+NI  NPKL+PGGGA ++ VS+ L++ SSSI G+ + P+ + A A +AIP+TLAQNCGV+V++ +T L+ KH    N +IGI+GN+G I+DM E  +W+   VK Q +KTAIE+ACMLLRIDD+VSG+KK++
Sbjct:  368 ECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITELRAKHNQEGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLKKQK 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.300e-50
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            DCKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    SRQ
Sbjct:  365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4)

HSP 1 Score: 198.364 bits (503), Expect = 4.300e-50
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            DCKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    SRQ
Sbjct:  365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.579e-50
Identity = 93/172 (54.07%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            DCKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    +RQ
Sbjct:  365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQ 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.579e-50
Identity = 93/172 (54.07%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            DCKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    +RQ
Sbjct:  365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQ 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.251e-49
Identity = 93/172 (54.07%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            +CKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + DMKE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    SRQ
Sbjct:  365 ECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.640e-49
Identity = 92/172 (53.49%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            +CKDPK CT+LL GASK++L+EVERNLQDAM V RN++ +P+L+PGGGA+++ V+  L +KS ++ G+++WPY + A A + IPRTL QNCG + I+ +T+L+ KH        G++G TG + D+KE  IW+   VK QT+KTA+E A +LLRIDDIVSG KKK    SRQ
Sbjct:  365 ECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPG_OXYGR1.093e-5358.14T-complex protein 1 subunit gamma OS=Oxytricha gra... [more]
TCPG_SCHPO2.978e-5158.28T-complex protein 1 subunit gamma OS=Schizosacchar... [more]
TCPG_XENLA1.478e-5051.89T-complex protein 1 subunit gamma OS=Xenopus laevi... [more]
TCPG_TETPY2.521e-5054.82T-complex protein 1 subunit gamma OS=Tetrahymena p... [more]
TCPG_PONAB4.300e-5054.65T-complex protein 1 subunit gamma OS=Pongo abelii ... [more]
TCPG_HUMAN4.300e-5054.65T-complex protein 1 subunit gamma OS=Homo sapiens ... [more]
TCPG_RAT9.579e-5054.07T-complex protein 1 subunit gamma OS=Rattus norveg... [more]
TCPG_MOUSE9.579e-5054.07T-complex protein 1 subunit gamma OS=Mus musculus ... [more]
TCPG_BOVIN1.251e-4954.07T-complex protein 1 subunit gamma OS=Bos taurus GN... [more]
TCPG_MACFA3.640e-4953.49T-complex protein 1 subunit gamma OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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