EY688650

Overview
NameEY688650
Unique NameEY688650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY688650_ssr439 microsatellite EY688650_ssr439:439..450. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2668 contig Csv1_Contig2668:176..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.414e-31
Identity = 65/97 (67.01%), Postives = 77/97 (79.38%), Query Frame = 2
Query:  101 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            P T A++CGQV+ SLAPCI++L  GG  PP  CC+GV+SLN AA+TTPDRQAAC CLK AY SI G NA  AA  P +CGVSIPYKISP+TDCS+V+
Sbjct:   21 PYTEALSCGQVSSSLAPCISYLTKGGAVPPA-CCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.372e-31
Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 2
Query:  116 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            ITCGQV+ SLAPCI +LR GG   P  CCNGVRSLN AA+TT DRQAACNCLK A+ SI G N N+AAGLP +CGVS+PYKISP+TDC  V+
Sbjct:    1 ITCGQVSSSLAPCINYLRAGG-VVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.163e-31
Identity = 61/97 (62.89%), Postives = 77/97 (79.38%), Query Frame = 2
Query:  101 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            P+  AITCGQV+ +LAPCI ++R GG  PP  CCNG+R++N  ARTTPDRQAACNCLKQ   S+PG N N AA LP +CGV+IPY+ISP+T+C+ V+
Sbjct:   22 PIAQAITCGQVSSNLAPCIPYVRGGGAVPPA-CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30
Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 2
Query:  101 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            P+  A+TCGQV+ +LAPCIA++R GG  PP  CCNG+R++N  A+TT DRQ ACNCLKQ   S+PG NAN AA LP +CGV++PYKISP+T+C+ V+
Sbjct:   22 PIAQALTCGQVSSNLAPCIAYVRGGGAVPPA-CCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.257e-29
Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 2
Query:  104 VTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            V +AITCGQVT SLAPCI ++R+GG  PP  CCNG+R++NG ARTT DRQ ACNCLK    SI G N N AAGLP +CGV++PYKIS +T+C+ V+
Sbjct:   21 VAHAITCGQVTSSLAPCIGYVRSGGAVPPA-CCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.495e-28
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 2
Query:  116 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            ITCGQV+ +LAPCI ++R GG  PP  CCNG+R++N  ARTTPDRQAACNCLKQ   S+PG N N AA LP +CGV IPYKIS +T+C+ V+
Sbjct:    1 ITCGQVSSALAPCIPYVRGGGAVPPA-CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.603e-27
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  116 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            ITCGQV+ SLAPCI ++R GG  PP  CCNG+R++N  ARTTPDR+ ACNCLKQ   SI G N N AA LP +CGV+IPYKIS +T+C+ V+
Sbjct:    1 ITCGQVSSSLAPCIGYVRGGGAVPPA-CCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.048e-26
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  116 ITCGQVTGSLAPCIAFLRTGGRFPPP-PCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRV 385
            +TCGQVTG+LAPC+ +LR+    P P  CCN VR LN AARTT D++ AC CLKQ   ++ G N N AAGLP +CGV+IPYKISP TDC+RV
Sbjct:   28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 2
Query:  116 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            ITCGQV+ +LAPCI +++ GG  PP  CCNG+R++N  ARTT DR+AACNCLKQ   SIPG N N AA LP +CGV++PYKIS +T+C+ V+
Sbjct:    1 ITCGQVSSNLAPCINYVKGGGAVPPA-CCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91          
BLAST of EY688650 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.050e-26
Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  104 VTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-NANVAAGLPRQCGVSIPYKISPNTDCSRVR 388
            V +AITC QV+ +LAPCI ++R+GG  PP  CCNG++++NG A+TTPDRQAACNCLK    S+ G N   A  LP +CGV++PYKIS +T+C+ V+
Sbjct:   21 VAHAITCSQVSANLAPCINYVRSGGAVPPA-CCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          
The following BLAST results are available for this feature:
BLAST of EY688650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
NLTP_HELAN1.414e-3167.01Non-specific lipid-transfer protein OS=Helianthus ... [more]
LTP1_MORNI5.372e-3170.65Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTP1_PRUDU9.163e-3162.89Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP_PRUAV2.666e-3060.82Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_MALDO2.257e-2963.54Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP1_PRUPE2.495e-2864.13Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP1_PRUAR3.603e-2763.04Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP_DAUCA1.048e-2661.96Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP1_PRUDO1.369e-2660.87Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_PYRCO3.050e-2656.25Non-specific lipid-transfer protein OS=Pyrus commu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-G08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688650 ID=EY688650; Name=EY688650; organism=Citrus sinensis; type=EST; length=596bp
CTGATAACTAGCTATAACCAAGCAAAAGCCTCCCTGAAAAATCCTCATGG
CTGCTCTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGACTGCC
CCAGTGACTAATGCCATAACATGTGGGCAGGTGACAGGCTCCTTGGCTCC
ATGCATCGCTTTCTTGAGAACTGGAGGGCGTTTTCCTCCACCCCCATGCT
GTAACGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTGACCGC
CAAGCTGCATGCAACTGCTTGAAGCAAGCTTACCGATCAATCCCCGGCAA
CGCTAATGTTGCCGCTGGCCTTCCTCGTCAATGTGGAGTCAGCATTCCTT
ACAAGATCAGCCCCAACACTGACTGCTCTAGGGTCAGGTGAAGTTGAGTT
TGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAATAAATAAATA
AAGAATATATATGTTAATTTCTTTGTCCGAACGAGTCTCCACTTGTGTGA
GTCTCACTCTCATGTCATGTTTGTATCTTTGCTTTTAATATCATATTAAA
TATGTAAACGTGATCTGTGTTTTGAGTGATTAAAAAAAAAAAAAAA
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