EY688622

Overview
NameEY688622
Unique NameEY688622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 6.517e-91
Identity = 162/196 (82.65%), Postives = 179/196 (91.33%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSGRTHD 589
            SKEFLTDI+K+AFA EYGLFSQT TSDRLL+P+ +AR+LENGIQM EFLGR+VGKALYEGILLDY+FSHVF+QKLLGRYSF+DELS LDPELYRNLMYVKHYDGD+KELCLDFTVTEE  GK  +IELKPGG DTSVTN+NKMQY+HAMADYKLNRQI PFSNAFYRGLTDLISP+ +K FNA EF+Q LSG  HD
Sbjct:  823 SKEFLTDITKAAFATEYGLFSQTPTSDRLLVPSPSARHLENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLGRYSFIDELSGLDPELYRNLMYVKHYDGDLKELCLDFTVTEEFCGKMSIIELKPGGKDTSVTNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHD 1018          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.070e-40
Identity = 88/195 (45.13%), Postives = 129/195 (66.15%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPN--AAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVK-ELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +KEFLT I K+ F   YGLFS+T     LL PN  A A+ +E  ++ +EFLG ++GK +YEGI +D AF+  FV K LG  S+ D+L++LDP LY  L+++K+YDGDV+ ++ L+FTV  E FG R+VI+L P G + SVTN+N++QY+H +++Y LN ++     AF  G T +I P  +  F+ SE    + G
Sbjct:  721 TKEFLTSICKTVFDINYGLFSETKA--HLLYPNTHAYAQDVER-LRCYEFLGMLIGKCIYEGIQIDAAFASFFVAKWLGHPSYFDDLTSLDPNLYEGLVFLKNYDGDVENDMALNFTVVHEEFGVRNVIDLIPNGSNISVTNENRLQYIHLVSNYYLNARLSRQCRAFTNGFTQIIDPHWLAMFHESEIQILVGG 912          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.359e-38
Identity = 84/195 (43.08%), Postives = 129/195 (66.15%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL--ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLD--ELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +EFL ++ KS F P  G F   +T++ LL PN AA+ L  ++  + + FLGR++GKALYE +L++  F+  F+ KLLG  + +D   L++LDPE+YRNL+++K Y+ DV+EL L+FTV     G+  V+ELK GG D  VT  N++ Y+H +ADY+LN+QI P   AF +GL +++S   ++ F+  E    +SG
Sbjct:  774 REFLNELLKSGFNPNQGFFK--TTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISG 966          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.177e-37
Identity = 82/196 (41.84%), Postives = 121/196 (61.73%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGR-----YSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            KEFL +I K  F P   LF  TS+ DRL  P+  +   EN +Q+FEF+G+++GKA+YEGI++D  F+  F+ +LLG      YS +DEL +LD E Y+NL  +K YDGD+ +L L  +  E+  G+    EL PGG    VTN+NK+ Y+H MA ++++ QI   + AF  G   +I P  ++ F+A E  + +SG
Sbjct:  736 KEFLEEIIKRVFDPALNLFKTTSSGDRLY-PSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDISDLGLTLSYDEDVMGQLVCHELVPGGKSIPVTNENKISYIHLMAHFRMHTQIKNQTVAFISGFRSIIRPEWIRMFSAPELQRLISG 930          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 4.149e-37
Identity = 83/195 (42.56%), Postives = 129/195 (66.15%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL--ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLD--ELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +EFL ++ KS F P  G F   +T++ LL PN AA+ L  ++  + + FLGR++GKALYE +L++  F+  F+ KLLG  + +D   L++LDPE+Y+NL+++K Y+ DV+EL L+FTV     G+  V+ELK GG D  VT+ N++ Y+H +ADY+LNRQI     AF +GL +++S   ++ F+  E    +SG
Sbjct:  774 REFLNELLKSGFNPNQGFFK--TTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTSANRIAYIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISG 966          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.059e-36
Identity = 77/192 (40.10%), Postives = 123/192 (64.06%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            K+F+  I+++AF  +YGLF +T+  D +L PN  +  + E  +Q F FLG ++ KA++EGIL+D  F+  F+ KL  +Y++L++L +LDPELYR+L+++K Y GD+ +L L F +    +G+R   EL PGG D  VTN+N + ++H +++++LN QI   S+ F RG   LI    +  FN  E    +SG
Sbjct:  718 KDFMEKITRAAFDVQYGLFKETA--DHMLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTEEELLPGGQDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKEWIDMFNEHELQVLISG 907          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 79/196 (40.31%), Postives = 118/196 (60.20%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGR-----YSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            KEFL +I K  F P   LF  TS  +RL  P+  +   EN +Q+FEF+G+++GKA+YEGI++D  F+  F+ +LLG      YS +DEL +LD E Y+NL  +K YDGD+ +L L  +  E+  G+    EL PGG    VTN+NK+ Y+H MA ++++ QI   + A   G   +I P  ++ F+  E  + +SG
Sbjct:  732 KEFLEEIIKRVFDPALNLFKTTSGDERLY-PSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDITDLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISG 926          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.927e-34
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGR-----YSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            KEFL +I K  F P   LF  TS  +RL  P+  +   EN +Q+FEF+G+++GKA+YEGI++D  F+  F+ ++LG      YS +DEL +LD E Y+NL  +K YDGD+ +L L  +  E+  G+    EL PGG    VT++NK+ Y+H MA ++++ QI   + A   G   +I P  ++ F+  E  + +SG
Sbjct:  734 KEFLEEIIKRVFDPALNLFKTTSGDERLY-PSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDIADLGLTLSYDEDVMGQLVCHELVPGGKTIPVTDENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISG 928          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NED4L_MOUSE (E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24
Identity = 62/193 (32.12%), Postives = 108/193 (55.96%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +SK  F P YGLF  ++T +  L  N  +    E+ +  F F+GRV G A++ G LLD  F   F + +LG+   L+++ ++D E Y +L ++   + D  EL L F + EE+FG+ + ++LKP G +  VTN+NK +Y+  +  ++   ++    NAF  G T+L+    +K F+ +E    + G
Sbjct:  693 AREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWI--LENDPTELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCG 883          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NED4L_HUMAN (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24
Identity = 62/193 (32.12%), Postives = 108/193 (55.96%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +SK  F P YGLF  ++T +  L  N  +    E+ +  F F+GRV G A++ G LLD  F   F + +LG+   L+++ ++D E Y +L ++   + D  EL L F + EE+FG+ + ++LKP G +  VTN+NK +Y+  +  ++   ++    NAF  G T+L+    +K F+ +E    + G
Sbjct:  664 AREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWI--LENDPTELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCG 854          
The following BLAST results are available for this feature:
BLAST of EY688622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
UPL7_ARATH6.517e-9182.65E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis th... [more]
YFK7_SCHPO3.070e-4045.13Probable E3 ubiquitin protein ligase C167.07c OS=S... [more]
UBE3C_MOUSE8.359e-3843.08Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ub... [more]
UBE3B_XENTR3.177e-3741.84Ubiquitin-protein ligase E3B OS=Xenopus tropicalis... [more]
UBE3C_HUMAN4.149e-3742.56Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UB... [more]
UPL6_ARATH2.059e-3640.10E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis th... [more]
UBE3B_HUMAN3.883e-3540.31Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UB... [more]
UBE3B_MOUSE1.927e-3439.29Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ub... [more]
NED4L_MOUSE1.384e-2432.12E3 ubiquitin-protein ligase NEDD4-like OS=Mus musc... [more]
NED4L_HUMAN1.384e-2432.12E3 ubiquitin-protein ligase NEDD4-like OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688622 ID=EY688622; Name=EY688622; organism=Citrus sinensis; type=EST; length=837bp
ATCAAAAGAGTTTTTGACTGATATATCAAAATCAGCTTTTGCTCCTGAGT
ATGGGCTATTTTCCCAAACCTCAACTTCAGACAGGCTCCTGATCCCTAAT
GCTGCCGCAAGATATCTAGAGAACGGTATCCAGATGTTTGAGTTCCTTGG
GAGAGTTGTTGGTAAAGCACTTTATGAAGGGATATTACTTGATTATGCCT
TTTCACATGTTTTTGTGCAAAAGTTGTTAGGCCGATATAGCTTCCTTGAT
GAGCTGTCAACACTTGATCCAGAGCTCTACCGGAATCTAATGTATGTCAA
GCATTATGATGGTGACGTCAAAGAACTGTGTCTGGATTTCACTGTCACAG
AAGAGTCATTTGGTAAACGACATGTTATTGAGCTAAAACCTGGTGGTGGG
GATACTAGTGTGACAAATGACAACAAGATGCAATATGTTCATGCTATGGC
TGATTATAAACTCAACCGGCAGATTTTTCCCTTCTCAAATGCATTTTACA
GAGGGTTAACTGATCTCATATCACCGTCTTGCGTGAAGTGATTTAATGCC
AGCGAATTCCATCAGTTCCTTTCGGGACGAACACATGACCGTAGATGGGT
ATCATTTGGGAGACGATACACGCGCAGACCGCGGCGATGACACACCGGAC
ACGGGACGCACACACATCACCCAGGACGCGAGAGAAGAGAAAACAACGAA
AAAAGAAAGAGAAAAGAAGCAACCAGGGACAACACAACAGACAGAACGCC
ACACCAACGCACCACCAAAAAGAGCAGCACCAGCCGACGCCCGCATCCCC
AAGAATCCCGCCAACAAGCCAACAAAGAGAGACATGA
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