EY688590

Overview
NameEY688590
Unique NameEY688590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688590 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.680e-44
Identity = 71/177 (40.11%), Postives = 93/177 (52.54%), Query Frame = 1
Query:   40 DQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKV 570
            D    H + R +V +V C  C   Q  QQ C  C    GEY+C+ C LFD D  KKQYH             +FFHC KC  C +M L+  H C+E     +CP+C E +  +R    VLPCGH +H+ C +EM +   Y CP+C  S  DM++ W + D E+A TPMP  Y N  V
Sbjct:   45 DNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLK-EGYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTV 218          

HSP 2 Score: 46.2098 bits (108), Expect = 2.680e-44
Identity = 19/33 (57.58%), Postives = 21/33 (63.64%), Query Frame = 2
Query:  578 LCNDCGKTSNVQFHVLAQKCTNCKSYNTRLTRG 676
            LCNDC   S VQFH+L  KC  C+SYNT    G
Sbjct:  221 LCNDCNGRSTVQFHILGMKCKICESYNTAQAGG 253          
BLAST of EY688590 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.933e-43
Identity = 68/172 (39.53%), Postives = 91/172 (52.91%), Query Frame = 1
Query:   55 HDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKV 570
            H + R +V +V C  C   Q  QQ C +C    GEY+C  C LFD D  K+QYH             +FFHC KC  C +  L+  H C+E     +CP+C E +  +R    VLPCGH +H+ C +EM +   Y CP+C  S  DM++ W + D E+A TPMP  Y N  V
Sbjct:   50 HQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLK-EGYRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTV 218          

HSP 2 Score: 45.4394 bits (106), Expect = 4.933e-43
Identity = 19/33 (57.58%), Postives = 20/33 (60.61%), Query Frame = 2
Query:  578 LCNDCGKTSNVQFHVLAQKCTNCKSYNTRLTRG 676
            LCNDC   S VQFH+L  KC  C SYNT    G
Sbjct:  221 LCNDCNGRSTVQFHILGMKCKLCDSYNTAQAGG 253          
BLAST of EY688590 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.289e-38
Identity = 67/194 (34.54%), Postives = 99/194 (51.03%), Query Frame = 1
Query:    1 RHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXX--NFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWI 576
            RHCHN+A +         H + R  V  ++C +C   Q   Q C  C  CMG Y+C  CKL+DDD +K  YH               ++FHC  C  C  + + N+H C+E +   +CP+C EY+F +R+ VI L C H +H+ C +E    + Y CP C K++ +++ ++   D EI   PMP  Y     WI
Sbjct:  163 RHCHNDACD---------HVLERPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTN-YRCPTCYKTIINVNSLFRILDMEIERQPMPYPY---NTWI 343          

HSP 2 Score: 38.891 bits (89), Expect = 3.289e-38
Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  581 CNDCGKTSNVQFHVLAQKCTNCKSYNT 661
            CNDC    + ++H L  KC +C SYNT
Sbjct:  348 CNDCNSRCDTKYHFLGHKCNSCHSYNT 374          
The following BLAST results are available for this feature:
BLAST of EY688590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZN363_HUMAN2.680e-4440.11RING finger and CHY zinc finger domain-containing ... [more]
ZN363_MOUSE4.933e-4339.53RING finger and CHY zinc finger domain-containing ... [more]
YERG_SCHPO3.289e-3834.54Uncharacterized RING finger protein C2F3.16 OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-A02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688590 ID=EY688590; Name=EY688590; organism=Citrus sinensis; type=EST; length=852bp
CGTCACTGTCATAACGAGGCAATGAATAATATTAATGTTGATCAGAAGCT
TAGGCATGACATTCCGCGGCATGAAGTCAACCAGGTGATATGTTCGCTCT
GTGGCACTGAACAAAAGGTTCAGCAAGTTTGTGTTAATTGTGGTGTATGC
ATGGGTGAATACTTCTGCGAGAGTTGCAAGCTGTTTGATGATGATACATC
CAAGAAGCAATATCATTGTGATGGATGTGGAATATGCAGGATTGGTGGAT
GTGATAATTTCTTCCATTGCAACAAGTGTAGATGCTGCTACTCAATGCTT
TTGAAGAACAGCCACCCATGTGTAGAAGGTGCAATGCATCATGACTGCCC
TGTCTGCTGTGAGTATTTATTCGAGACAAGACAGGATGTAATTGTCTTGC
CGTGTGGGCATACCATTCACAAAAATTGCTTGAAGGAGATGCGGGAACAT
CATCAATATGCCTGTCCTATCTGCTCCAAGTCAGTCTGTGACATGTCCAA
AGTATGGGAGAAATATGACAGGGAGATAGCGGCTACTCCAATGCCAGAAG
CTTACCTAAATAAAAAGGTTTGGATCCCTTTGCAATGACTGTGGTAAGAC
CTCTAATGTCCAGTTCCATGTGCTGGCTCAGAAGTGCACAAACTGCAAGT
CCTACAACACTCGCTTGACCAGGGGCTGAGCAAGTGGCAATATTGTTAAC
AATGATGGTGAATGGAGAAGGTAACCTCTCTGGATTGATGTGGAAAGGCT
CCGGGACCTTATATAATCTTTCCAACCTTCACGGCCAAGCGGACTTTCTC
ATTTATGGGGGTAGGGGCCTGCATCAAACAATTTGACACTTGGGGGGGAA
CC
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