EY688577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_ARATH (Transcription initiation factor IIA subunit 2 OS=Arabidopsis thaliana GN=TFIIA-S PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 5.018e-49 Identity = 95/106 (89.62%), Postives = 103/106 (97.17%), Query Frame = 2 Query: 101 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 418 MATFELYRRSTIGMCLTETLDEMVQ+GTL+PELAIQVLVQFDKSMTEALE+QVK+KVSIKGHLHTYRFCDNVWTFILQDA+FKS++ QE V RVKIVACDSKLL+Q Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIKGHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_ORYSJ (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica GN=TFIIAy PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47 Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 2 Query: 101 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 418 MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVACDSKLLSQ Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_ORYSI (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. indica GN=TFIIAy PE=3 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47 Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 2 Query: 101 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 418 MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVACDSKLLSQ Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_ONCMY (Transcription initiation factor IIA subunit 2 OS=Oncorhynchus mykiss GN=gtf2a2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 52/99 (52.53%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 406 ++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ KG L+TYRFCDNVWTF+L D F+ V +VKIVACD K Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_PAROL (Transcription initiation factor IIA subunit 2 OS=Paralichthys olivaceus GN=gtf2a2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.620e-25 Identity = 53/108 (49.07%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ*DNED 433 ++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL ++V+++V+ +G L+TYRFCDNVWTF+L D F+ V +VKIVACD K S + D Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALASRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKSESTQNKSD 110
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_RAT (Transcription initiation factor IIA subunit 2 OS=Rattus norvegicus GN=Gtf2a2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 406 ++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D F+ V +VKIVACD K Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_MOUSE (Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 406 ++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D F+ V +VKIVACD K Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_HUMAN (Transcription initiation factor IIA subunit 2 OS=Homo sapiens GN=GTF2A2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.470e-24 Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 406 ++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D F+ V +VKIVACD K Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_DICDI (Transcription initiation factor IIA subunit 2 OS=Dictyostelium discoideum GN=gtf2a2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24 Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 2 Query: 110 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACDSKL 409 +ELYR+STIG LT+TL+E++ N ++ L ++L QFDK++ EAL VK+K + KG LHTYRFCD+VWTFIL++A FK+E + V RVKIVACD+ + Sbjct: 8 YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFKGSLHTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDANV 108
BLAST of EY688577 vs. ExPASy Swiss-Prot
Match: T2AG_DROME (Transcription initiation factor IIA subunit 2 OS=Drosophila melanogaster GN=TfIIA-S PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.621e-23 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 107 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 406 +++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G L+TYRFCDNVWT +L D F+ V +VKIVACD K Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGK 102 The following BLAST results are available for this feature:
BLAST of EY688577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY688577 ID=EY688577; Name=EY688577; organism=Citrus sinensis; type=EST; length=740bpback to top |