EY688564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: RHA1B_ARATH (RING-H2 zinc finger protein RHA1b OS=Arabidopsis thaliana GN=RHA1B PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 116 MGFPVGYTEVFLPKFFVHTLSFLGFIRNIIICLFRYLGLSDFLETDVIWPDNSPTRIPENAPVSARLIREILPVIKFQDLEMVNGDPPENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPW-MDHDQKTCPLCRTPFVPDEMQEEFNQRLWAASGVDDLFSED 604 MG P + E+ +P + + TL +GF R+++ L Y+GL FL+ + + PTR+ + SA L E++PV++F DL DP + C VCL +F ++IR L C H+FH CLD W +D ++ TCP+CR F+P+E F+ W G D F ++ Sbjct: 1 MGLPTDFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLDHNET-SRSDPTRLALST--SATLANELIPVVRFSDLLT---DPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPEEKSTPFD---W---GTSDWFRDE 152
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: RHA1A_ARATH (RING-H2 zinc finger protein RHA1a OS=Arabidopsis thaliana GN=RHA1A PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.846e-22 Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = 2 Query: 116 MGFPVGY-TEVFLPKFFVHTLSFLGFIRNIIICLFRYLGLSDFLETDVIWPDNSPTRIPENAPVSARLIREILPVIKFQDLEMVNGDPPENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPW-MDHDQKTCPLCRTPFVPDEMQEEFNQRLWAASGVDDLFSED 604 MG P + TE+ +P + + L +GF R+I+ L Y+GL FL+ + ++P SA L E++PV++F DL DP + C VCL +FE +++R L C H+FH CLD W +D+++ CP+CR F+P +E++ Q W + D FS++ Sbjct: 1 MGLPEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLDHN---ETSAPDLTRHALSTSASLANELIPVVRFSDLPT---DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLP---KEKYTQSDWGSG--SDWFSDE 154
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe GN=SPBP4H10.07 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11 Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 2 Query: 332 PVIKFQDLEMVNGDPP-----ENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPWMDHDQKTCPLCRT 520 PV +DLE G P E C VCL FE +E R L+ C H FHR C+D W+ Q +CPLCRT Sbjct: 502 PVASQKDLEKAGGVFPFSGTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: RN167_RAT (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 311 RLIREILPVIKFQDLEMVNGDPPENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPWMDHDQKTCPLCRTPF---VPDEMQEEFNQ 559 RL +E L I D + GD + CA+CL E+E G+++R L C H +H C+DPW+ +KTCP+C+ P DE QEE Q Sbjct: 207 RLTKEQLKQIPTHDYQ--KGDEYDVCAICLDEYEDGDKLRILP-CAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQ 289
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: RN167_MOUSE (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 311 RLIREILPVIKFQDLEMVNGDPPENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPWMDHDQKTCPLCRTPF---VPDEMQEEFNQ 559 RL +E L I D + GD + CA+CL E+E G+++R L C H +H C+DPW+ +KTCP+C+ P DE QEE Q Sbjct: 207 RLTKEQLKQIPTHDYQ--KGDEYDVCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQ 289
BLAST of EY688564 vs. ExPASy Swiss-Prot
Match: RN167_HUMAN (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 311 RLIREILPVIKFQDLEMVNGDPPENCAVCLYEFEGGEEIRWLRNCKHIFHRACLDPWMDHDQKTCPLCRTPF---VPDEMQEEFNQ 559 RL +E L I D + GD + CA+CL E+E G+++R L C H +H C+DPW+ +KTCP+C+ P DE QEE Q Sbjct: 207 RLTKEQLKQIPTHDYQ--KGDQYDVCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQ 289 The following BLAST results are available for this feature:
BLAST of EY688564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY688564 ID=EY688564; Name=EY688564; organism=Citrus sinensis; type=EST; length=851bpback to top |