EY688557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 74/132 (56.06%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 57 MKGGRSKADAVGTDSKLKSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 452 MKGG+SKA + D+KL K +A SAFFVFME+FRK +KE HPNNKSVA VGKA G+KWK ++ EKAPF+ KAEKRK +Y KN+Q YNK+ A G AAEE ESDKS+SEVN Sbjct: 1 MKGGKSKAKS---DNKLAVK-KQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG--AAEEEESDKSRSEVN 126
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30 Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = 3 Query: 57 MKGGRSKADAVGTDSKL----KSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 452 MKGG+SK ++ D KL K +A K SAFFVFMEEFRK F + HP NK+V+ VGKAAG KWK+MSD EKAP+V K+EKRK +Y KNM+ YNK+ A+G +E ES+KS SEVN Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVN 136
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27 Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 3 Query: 57 MKGGRSKADAVGTDSKL--KSKGARA---GKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 452 MKGG+SK ++ ++KL KGA A GK+ SAFFVFM +FR+Q+K+ HPNNKSVA VGKA GE+WKS+S++EKAP+V++A K+K +Y +Q YNK+L +E SDKSKSEVN Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLE---GKDDEEGSDKSKSEVN 134
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.651e-27 Identity = 71/142 (50.00%), Postives = 86/142 (60.56%), Query Frame = 3 Query: 57 MKGGRSKADAVGTDSKL--KSKGARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDYNKQLADGVNAA--------EENESDKSKSEVN 452 MKG +SK A D+KL KSKGA + SAFFVFMEEFRK+FKE +P NKSVA VGKAAG++WKS+S+ +KAP+V KA K K +YNK + YNK + A +E ESDKSKSEVN Sbjct: 1 MKGAKSKG-AAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVN 141
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25 Identity = 70/146 (47.95%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 57 MKGGRSKADAVGTDSKL--KSKGA-RAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDYN-----------KQLADGVNAAEENESDKSKSEVN 452 MKG +SK A D+KL KSKGA + + SAFFVFM EFR++FK+ +P NKSVA VGKAAGE+WKS+S+ EKAP+V KA K K +YNK + YN K A V +E ESDKSKSE+N Sbjct: 1 MKGAKSKG-AAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEIN 145
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 72 SKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDY-NKQLADGVNAA---------EENESDKSKSE 446 +KAD V D ++K G A+ GK+ S FF+F EFR + K A+P S+ V K GE W ++SD EK P++ KA K K Y K++ DY +K DG A EE+E D+ + E Sbjct: 64 AKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGAKGAAKVARKKVEEEDEEDEEEEE 192
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 49/149 (32.89%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 30 KTLTSPGFIMKGGRSKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDY-NKQLADGVNA--------AEENESDKSKSE 446 KT++S +KAD V D ++K G A+ GK+ S FF+F EFR + K +P S+ V K GE W ++SD+EK P+V KA K K Y K++ DY +K DG EE E ++ + E Sbjct: 50 KTMSSKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEE 191
BLAST of EY688557 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 48/141 (34.04%), Postives = 66/141 (46.81%), Query Frame = 3 Query: 30 KTLTSPGFIMKGGRSKADAVGTDSKLKSKG-ARAGKRTXXXXXXXXXXXXXXXXSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSDDEKAPFVEKAEKRKSDYNKNMQDY-NKQLADGVNAAEENESDKSKSE 446 KT++S +KAD V D ++K G A+ GK+ SAFF+F EFR + K +P S+ V K GE W ++SD EK P+ KA K K Y K++ DY +K DG A + K E Sbjct: 50 KTMSSKEKAKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPP------SAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEE 183 The following BLAST results are available for this feature:
BLAST of EY688557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY688557 ID=EY688557; Name=EY688557; organism=Citrus sinensis; type=EST; length=718bpback to top |