EY688522

Overview
NameEY688522
Unique NameEY688522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: Y1390_ARATH (Uncharacterized protein At1g03900 OS=Arabidopsis thaliana GN=At1g03900 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGEL-HPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            EW  +   W G L+VVS  ++C I+LED ++G+L+A  F+  G   + VEP +DSSRYFV  I++  G    +AFI + F ER   +DF  AL D       H    + E+  +T  T++
Sbjct:   40 EWLQSDKIWSGRLRVVSCKDRCEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRG---KYAFIGLGFAERNEAFDFNVALSD-------HEKYVRREKEKETGETSE 149          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP2_HUMAN (Adaptin ear-binding coat-associated protein 2 OS=Homo sapiens GN=NECAP2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPD 283
            EW ++  +W G L++ +KG+   IKLED+++GEL+A+A + +     VE V DSSRYFV  IE+  G     AFI I F +R   +DF  AL D
Sbjct:   34 EWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQD 124          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP2_BOVIN (Adaptin ear-binding coat-associated protein 2 OS=Bos taurus GN=NECAP2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPD 283
            EW ++  +W G L++ +KG+   IKLED+++GEL+A+A + +     VE V DSSRYFV  IE+  G     AFI I F +R   +DF  AL D
Sbjct:   34 EWQLDQPSWSGRLRITAKGQVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQD 124          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP2_RAT (Adaptin ear-binding coat-associated protein 2 OS=Rattus norvegicus GN=Necap2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPD 283
            EW ++  +W G L++ +KG+   IKLED+++GEL+A+A + +     VE V DSSRYFV  IE+  G     AFI I F +R   +DF  AL D
Sbjct:   34 EWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGIGFGDRGDAFDFNVALQD 124          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP1_PONAB (Adaptin ear-binding coat-associated protein 1 OS=Pongo abelii GN=NECAP1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            +W ++   W G L++ SKG+   IKLEDK +GEL+A+A + +     VE V DSSRYFV  I++  G     AFI I F +R   +DF  +L D    +   +   +  Q +  R   D
Sbjct:   35 DWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLD 150          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP1_HUMAN (Adaptin ear-binding coat-associated protein 1 OS=Homo sapiens GN=NECAP1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            +W ++   W G L++ SKG+   IKLEDK +GEL+A+A + +     VE V DSSRYFV  I++  G     AFI I F +R   +DF  +L D    +   +   +  Q +  R   D
Sbjct:   35 DWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLD 150          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP1_BOVIN (Adaptin ear-binding coat-associated protein 1 OS=Bos taurus GN=NECAP1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            +W ++   W G L++ SKG+   IKLEDK +GEL+A+A + +     VE V DSSRYFV  I++  G     AFI I F +R   +DF  +L D    +   +   +  Q + +R   D
Sbjct:   35 DWKLDQPDWTGRLRITSKGKVAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFSDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDSRPKLD 150          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP2_MOUSE (Adaptin ear-binding coat-associated protein 2 OS=Mus musculus GN=Necap2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPD 283
            EW ++  +W G L++ +KG+   IKLED+++GEL+A+A + +     VE V DSSRYFV  IE+  G     AFI + F +R   +DF  AL D
Sbjct:   34 EWQLDQPSWSGRLRITAKGKVAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNG---RRAFIGLGFGDRGDAFDFNVALQD 124          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP1_RAT (Adaptin ear-binding coat-associated protein 1 OS=Rattus norvegicus GN=Necap1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            +W ++   W G L++ SKG+   IKLEDK +GEL+A+A + +     VE V DSSRYFV  I++  G     AFI I F +R   +DF  +L D    +       +  Q + +R   D
Sbjct:   35 DWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVADSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDSRPKLD 150          
BLAST of EY688522 vs. ExPASy Swiss-Prot
Match: NECP1_MOUSE (Adaptin ear-binding coat-associated protein 1 OS=Mus musculus GN=Necap1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2
Query:    2 EWNVNPCAWEGMLKVVSKGEQCIIKLEDKSTGELYARAFLRKGELHPVEPVIDSSRYFVRGIEENIGGPLTHAFIAIRFRERTHPYDFRPALPDGVPHLDPHNHAEQMEQPLQTRSTAD 358
            +W ++   W G L++ SKG+   IKLEDK +GEL+A+A + +     VE V DSSRYFV  I++  G     AFI I F +R   +DF  +L D    +       +  Q +  R   D
Sbjct:   35 DWKLDQPDWTGRLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTG---RSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQETEISKESQEMDNRPKLD 150          
The following BLAST results are available for this feature:
BLAST of EY688522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
Y1390_ARATH5.322e-1337.50Uncharacterized protein At1g03900 OS=Arabidopsis t... [more]
NECP2_HUMAN5.322e-1343.62Adaptin ear-binding coat-associated protein 2 OS=H... [more]
NECP2_BOVIN9.079e-1343.62Adaptin ear-binding coat-associated protein 2 OS=B... [more]
NECP2_RAT1.186e-1243.62Adaptin ear-binding coat-associated protein 2 OS=R... [more]
NECP1_PONAB1.186e-1236.13Adaptin ear-binding coat-associated protein 1 OS=P... [more]
NECP1_HUMAN1.186e-1236.13Adaptin ear-binding coat-associated protein 1 OS=H... [more]
NECP1_BOVIN1.186e-1236.13Adaptin ear-binding coat-associated protein 1 OS=B... [more]
NECP2_MOUSE2.022e-1242.55Adaptin ear-binding coat-associated protein 2 OS=M... [more]
NECP1_RAT2.022e-1236.13Adaptin ear-binding coat-associated protein 1 OS=R... [more]
NECP1_MOUSE2.641e-1236.13Adaptin ear-binding coat-associated protein 1 OS=M... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-072-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688522 ID=EY688522; Name=EY688522; organism=Citrus sinensis; type=EST; length=823bp
TGAATGGAATGTTAACCCCTGTGCATGGGAGGGAATGCTAAAAGTTGTCA
GCAAGGGAGAACAGTGCATTATCAAACTTGAAGATAAGTCCACAGGTGAG
TTATATGCTCGGGCATTTTTGAGAAAGGGTGAACTGCATCCAGTGGAACC
TGTGATTGATAGCAGCAGGTACTTTGTTCGTGGGATAGAGGAAAACATAG
GTGGTCCCCTTACGCATGCTTTCATTGCCATCAGATTCCGGGAAAGGACG
CACCCTTATGATTTCCGCCCAGCCCTTCCTGATGGCGTGCCACATTTAGA
CCCGCACAACCATGCCGAACAAATGGAACAACCACTCCAGACGCGCTCGA
CTGCCGATCGCACGCCAGCCACGGGGAGCCCCTACCCCCGGGGGGCGGGG
GGGCGGGCGACCGCGCCAAGACCAGCGCCACACAACCCCCCGACGCCCCA
CACCCCCCGCCAACACGAGCCGCGAGGCGCCACGACACAAGAGGGACCGA
GAGCAAAGCCAACGCCCGAGACGACCGACACCGCGAAGGAGCAGAGCGGA
GGCCAGGCAGGCCGCGGGCCAGGCGCCAGGGGGCCCACCCAGCGCGGCCA
GCCACGGGCCCCCGAACGGAGACCAGCCACAAGCCGAGCCCGGCCAAGAC
CCAGCCACAGCGCCACACCGGACGCACCAACCAAGCAGCACGCACACCCC
CGCGGCCGCAAGACACTAAGCGACCCACCGGCAGGGGAACAAACGACACA
CACAGAACGCAAGGACCGGACACACCGGACGAGCCACCCACGCCCCAGCC
CAGACGACACCACAGCGCCCCCG
back to top