EY688492

Overview
NameEY688492
Unique NameEY688492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688492 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.863e-43
Identity = 88/132 (66.67%), Postives = 105/132 (79.55%), Query Frame = 3
Query:  108 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNV 485
            RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K R   +  R     RI ECL+GDETG I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E    A+FTVKEDNNLSL+EYEL+NV
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149          
The following BLAST results are available for this feature:
BLAST of EY688492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH6.863e-4366.67Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-072-E04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688492 ID=EY688492; Name=EY688492; organism=Citrus sinensis; type=EST; length=861bp
CTTACTCTCTCTTGACTCTGCCTCTTCCTTCAATTCCCAAAATCATTTCG
TGTCTCCACTCACGTTTTTTAGTTTTGCTGGAAATGGCAGAATCAAAATC
AGGATTGAGGAAACCAGTTTTTACCAAGGTTGATCAGCTACGCCCGGGTA
CTAGTGGGCACACTCTCACAGTGAAGGTCGTGAGTACGAAGATGGTATTG
CAGAAGGGTCGTGGTGATGGAACACAAGTACGTCAGATGCGAATTGCTGA
ATGCTTGGTTGGTGATGAGACAGGAATGATTATCTTTACTGCTAGAAATG
ATCAAGTGGACCTGATGAAAGAGGGTACTACTGTGATTCTGCGCAATGCA
AAAATTGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAAGTGGGG
CCGTGTTGAAGTTGCAGAGCCTGCCAATTTCACCGTGAAGGAAGATAACA
ACCTCTCTCTGATTGAATATGAGCTTGTGAATGTTGTAGAAGAGTGAATT
TCTGGACGGTGTTCACTTACTCACTGCAATGTGACCCAAGAATAAAAAGA
AATCCAGCATATCATAGTACTGTCGTTTATGCGGCATCTCCTGTCCAAAA
CTGTGGTGCCTTTAGGAAGAAGAAATCTGGAAGCTATTACTACCCAAGAT
GCTTTCTACCGTTGTGGCAAATCCAGTAAAACCTTTTGATTGGACCTCCC
AACAGATGGGGATGGCTCTAAAGTTGGATAATGAAAACCAGCTGGCATTT
AAAACTGGCTTTGGGTTTGTTTGCCAACTATTTATTTTTGGAATTCAACT
GGTCCTTTGGCTTATTAAAATTAACTTTGAAATATTAATAATCCGGGAAA
GGGTATGTTAT
back to top