EY688403

Overview
NameEY688403
Unique NameEY688403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY688403_ssr33 microsatellite EY688403_ssr33:33..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 3
Query:   33 QQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            +Q Q  +PNRC+ CRKR+GLTGFKCRCGT+FCG HRYPE HGCS+DFK  GREEIA+ANPL+KA KL+KI
Sbjct:  101 EQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 3
Query:   33 QQQQPPQ-PNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            +Q  PPQ PNRC+VCRKR+GLTGF CRCGT FCG+HRYPE HGC+FDFK  GREEIA+ANPL+ A KL+KI
Sbjct:   91 EQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.410e-24
Identity = 45/67 (67.16%), Postives = 60/67 (89.55%), Query Frame = 3
Query:   45 PPQ-PNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            PPQ P RC  CR+R+G+TGF+CRCG +FCGTHRY E+H CSFDFK++G+++IA+ANP++KA+KLEKI
Sbjct:   97 PPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23
Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 3
Query:    6 ADVAVVLEHQQQQPPQP----NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            + V V  E  + +P +P    NRC  C K++G+ GFKC+CG+ FCG+HRYPEKH CSFDFK+VGR+ IA+ANPL+KA+K+++I
Sbjct:   93 SSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.192e-22
Identity = 42/75 (56.00%), Postives = 59/75 (78.67%), Query Frame = 3
Query:   15 AVVLEHQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEK 239
            AV   ++  +P + NRC  C K++G+ GFKC+CG+ FCG HRYPE H CSFDFK+VGR EIA+ANP++KA+K+++
Sbjct:  101 AVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.192e-22
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 3
Query:    6 ADVAVVLEHQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            AD   V+E    +PP  NRC  CRK++GLTGFKCRCG  FC  HRY + H C+FD+K+VGRE+IA+ NPL+KA+K+ KI
Sbjct:   83 ADGKQVMEEDTPKPPS-NRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.192e-22
Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 3
Query:   18 VVLEHQQQQPPQPNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            VV   +  +P  P+RC+ C KR+GLTGFKCRCG++FCGTHRY + H CSF++    +E IA+ANP++KAEKL+KI
Sbjct:   99 VVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.110e-22
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 3
Query:   15 AVVLEHQQ--QQPPQP--NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            A  +E +Q  Q+PP+P  NRC  CRK++GLTGF+CRCG  FC THRY E H C+FD+KK GR++IA+ NP++ AEK+ KI
Sbjct:   82 AAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 3
Query:   54 PNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            PNRCS CRKR+GLTGF CRCG ++C  HRY +KH C FD++   R+ IA+ANP++KAEKL+KI
Sbjct:  109 PNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 3
Query:   54 PNRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            PNRCS CRKR+GLTGF CRCG ++C  HRY +KH C FD++   R+ IA+ANP++KAEKL+KI
Sbjct:  109 PNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
The following BLAST results are available for this feature:
BLAST of EY688403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP6_ARATH5.084e-2874.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH4.304e-2774.65Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH3.410e-2467.16Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH1.296e-2355.42Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH3.192e-2256.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ3.192e-2258.23Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH3.192e-2257.33Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ7.110e-2257.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSJ2.069e-2163.49Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI2.069e-2163.49Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-070-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688403 ID=EY688403; Name=EY688403; organism=Citrus sinensis; type=EST; length=895bp
AGGATGCCGACGTGGCTGTGGTCCTCGAGCACCAGCAGCAGCAGCCACCG
CAGCCGAATCGGTGTTCGGTTTGTAGGAAACGGATCGGGTTGACGGGTTT
CAAGTGCAGGTGCGGGACCATCTTCTGTGGGACCCACCGGTACCCGGAGA
AGCACGGATGCTCGTTTGATTTCAAGAAGGTTGGCCGAGAGGAGATTGCT
CGAGCTAATCCTTTGATCAAAGCCGAGAAGCTCGAGAAGATTTGATTCCC
ACCGTCCGGATCTCATTACTTTTTAGGAAATGAAGACGTCGTGTAATCAA
CGTCGTCAGGACCGTACATCCGGTCATGCCTGAGGCTTGATGGTTGATAA
ATATTCTCTCTTTTTTCTTTTTTTCTTAATTTTAATTTTTACTAACGCTA
ATTTTGGCTTCTTCTTTTTTTCTTTTTCTTTTTTTAAATGCATGTAAAAA
GTTTGGGTTAAAAAAGAAATTGGGAGGAGGTTTCATCCCTTTAAAGACAC
AAATAAAAATTTTTAAATATTTATTCGGCTACTACGAGATTATATTATAT
AATTTCAAAAAAACCAACACAAAAAGGGGGGGCCCACTTAAAAGAGATAA
AATTTAAATACGCGGGGTTGCAACGGCCTACCTCCATCAAAAGGAGCCCC
AAAATTTATTTTTGTTGGCCCCCCTTTTTCACGCCCTGGGATGGGGAAAA
AACCGACACGTCCACAAATCAACACCCTCCGCCCATTATTTTCTCTATTT
TTATTTTGGGTTAATTATTGAAGAAGGCCCTCCGGGCGTTCGCTTTTTCA
ATATATTTTCATACTTTAAACGGGGTATAGGGTTCTGCCCCCCGTCGCTT
CGGGCCGCACCCCCCCGGGGCCCCCGCCCCCGGAGCCCCCCGCCA
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