EY688034

Overview
NameEY688034
Unique NameEY688034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8971 contig Csv1_Contig8971:1..532. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY688034 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.010e-24
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 2 
Query:    2 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 232
            GVHNL  +I KRIR++GF+  D+Y  YPKFLELV+P I+EGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V +A
Sbjct:  265 GVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIA 341
[Close]
BLAST of EY688034 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.117e-23
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 2 
Query:    2 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 232
            GVHNL  +I KRIR++GF+  D+Y  Y KFLE V+P IREGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V VA
Sbjct:  267 GVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343
The following BLAST results are available for this feature:
BLAST of EY688034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
P2_ARATH1.010e-2466.23Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
P1_ARATH1.117e-2366.23Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-056-B05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688034 ID=EY688034; Name=EY688034; organism=Citrus sinensis; type=EST; length=532bp
AGGCGTACACAACTTAGAGCAACTGATTGGGAAACGGATTCGCCTGGAAG
GATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATTCTTGGAACTG
GTCATTCCTGCAATCAGAGAAGGAAAGATGGTGTATGTGGAAGACATAGC
CGAAGGACTCGAGAATGCTCCTGCAGCCCTTGTCGGGCTCTTCACTGGCC
GGAACGTCGGCAAGCAGCTAGTTGCAGTTGCTTAATACAAAAGCCGATAT
GTATGAGCTGAGAATATGTGACTGAATCCATTGTCCGGTTAAAAATGTTT
ACATGTGTTAATATGAGCTACCCTCGTTTAGTAATGGGATTGGATTGTCC
TGTCATTACTTAATTTTGTTGAGCTAGGGCATCTGTGTGTAAAGTGTCAA
ATAATTTGGATTCAGACAAGAACTTAGTGGATGCATTGAAGGATTTTTTT
TANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAANAAAAAAAAAGGGGG
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