EY687016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14 Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 14 ESEWRNWNWRSEGDLMVNGAFFTXXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 ESEW+NWNWRSEGDLM+NGA+F RPS LV +T SAGAL+C+KG+RC Sbjct: 337 ESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 2 Query: 14 ESEWRNWNWRSEGDLMVNGAFFTXXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 ESEW+ WNWRS GDL++NGAFFT +PS+LVGP+T ++GAL C+KG+RC Sbjct: 344 ESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 2 Query: 17 SEWRNWNWRSEGDLMVNGAFFTXXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 S+W+ WNWRSEGDL +NGAFFT RPS+LV +T +AGAL C+KG+RC Sbjct: 345 SKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 2 Query: 14 ESEWRNWNWRSEGDLMVNGAFF--TXXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 ES+WR+WNWRSEGDLM+NGA+F T RPS+LVG IT +AG + CKKG+RC Sbjct: 338 ESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 14 ESEWRNWNWRSEGDLMVNGAFFTXXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 ES+WR+WNWRSEGD+++NGA+F RPS+LVG IT +AG L C++G RC Sbjct: 345 ESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 409
BLAST of EY687016 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11 Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 2 Query: 14 ESEWRNWNWRSEGDLMVNGAFFT--XXXXXXXXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 208 E EWRNWNWRSEGDL++NGAFFT RPS+ VG IT ++GAL CK+G+ C Sbjct: 366 EDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432 The following BLAST results are available for this feature:
BLAST of EY687016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY687016 ID=EY687016; Name=EY687016; organism=Citrus sinensis; type=EST; length=886bpback to top |