EY686944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.492e-19 Identity = 57/100 (57.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 105 MGATDXASLFAPANFSTTESSAPRKQS-SSFSIRPLKHNAPRTNTIKDMADGKTETPTKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITW 401 M ASLF PA S +SSAP KQS +SFS + LK I+ MA+ + T EAP GFTPP+L+ NT SPIF GSTGG+LRKAQV+EFYVITW Sbjct: 1 MAMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITW 98
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.397e-17 Identity = 59/136 (43.38%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 111 ATDXASLFAPANFSTTESSAPRKQSSSFSIRPLKHNAPRTNTIKDMADGKTETPT-KEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITWGDS*GANN*K*PMREQP*SYKA-----RNVMKLARQKR 500 AT A +F+PA +TT S+ + S S RP + +T + + + P KEAP GFTPP+L+ NT SPIF GSTGG+LRKAQV+EFYVITW N+ K + E P A N++KLAR+++ Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITW------NSPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 130
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.112e-17 Identity = 54/102 (52.94%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 105 MGATDXASLFAPANFSTTESSAPRKQSS-SFSI-RPLKHNAPRTNTIKDMAD-GKTETPTKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITW 401 M ASLF P ++AP KQS SFS + LK T I+ MA+ T K AP GFTPP+L+ NT SPIF GSTGG+LRKAQV+EFYVITW Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITW 102
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.544e-16 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 105 MGATDXASLFAPANFSTTESSAPRKQSS-------SFSIRPL-KHNAPRTNTIKDMADGKTE--TPTKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITW 401 M A+LF+P++ S+ + R +S +F+ +P +H++ R A+GK T TKEAP GFTPPEL+ NT SPIF GSTGG+LRKAQV+EFYVITW Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRAAAA---AEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITW 106
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.001e-15 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 105 MGATDXASLFAPANFSTTES---SAPRKQSSSFSI---RPLKHNAPRTNTIKDMADGKTETPTKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITW 401 M A+LF P+ ST +S S P KQSS+ S +P A + + K A+ +T EAP GF+PPEL+ +T SPIF GSTGG+LRKAQV+EFYVITW Sbjct: 1 MAMATQATLFTPS-LSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITW 101
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.804e-15 Identity = 56/139 (40.29%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 111 ATDXASLFAPANFSTTESSAPRKQSSSFSIRPLKHNAPRTNTIKDMADGKTETP----TKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITWGDS*GANN*K*PMREQP*SYKA-----RNVMKLARQKR 500 AT A +F A + S + S + RP + +T + D TKEAP GFTPP+L+ NT SPIF GSTGG+LRKAQV+EFYVITW N+ K + E P A N++KLAR+++ Sbjct: 2 ATQAAGIFNSAITTAATSGVKKLHFFSTTHRPKSLSFTKTAIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITW------NSPKEQIFEMPTGGAAIMREGPNLLKLARKEQ 134
BLAST of EY686944 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.145e-11 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 3 Query: 270 PTKEAPGGFTPPELERNTRSPIFRGSTGGMLRKAQVQEFYVITW 401 P + AP GF PP+L+ +T SPIF GSTGG+LRKAQV+EFYVITW Sbjct: 56 PAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITW 99 The following BLAST results are available for this feature:
BLAST of EY686944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY686944 ID=EY686944; Name=EY686944; organism=Citrus sinensis; type=EST; length=1076bpback to top |