EY686943

Overview
NameEY686943
Unique NameEY686943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1179
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_RALPJ (D-galactonate dehydratase OS=Ralstonia pickettii (strain 12J) GN=dgoD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.258e-14
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIAAMAEAYDVALA HCPLGPIALA CL ++   W + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECVKIAAMAEAYDVALAPHCPLGPIALAACLHVDFVSWNATLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_RALSO (D-galactonate dehydratase OS=Ralstonia solanacearum GN=dgoD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.803e-14
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGM 285
            PD SH GGITE  KIA MAEAYDVALA HCPLGPIALA CL I+   W + + ++S+G+
Sbjct:  257 PDLSHAGGITECLKIAGMAEAYDVALAPHCPLGPIALAACLHIDFVSWNATLQEQSMGI 315          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_VEREI (D-galactonate dehydratase OS=Verminephrobacter eiseniae (strain EF01-2) GN=dgoD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.781e-14
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGI+E  KIAAMAEA+DVA+A HCPLGPIALA+CL ++   W + + ++ +GM   R  E+
Sbjct:  257 PDLSHAGGISECLKIAAMAEAHDVAIAPHCPLGPIALASCLHVDYVSWNATLQEQGMGMHYNRGGEV 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_VARPS (D-galactonate dehydratase OS=Variovorax paradoxus (strain S110) GN=dgoD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.065e-13
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIAAMAEAYDVA A HCPLGP+ALA CLQ++     + + ++S+G+   R  E+
Sbjct:  257 PDLSHAGGITECHKIAAMAEAYDVAFAPHCPLGPVALAACLQVDFVAHNAVLQEQSMGIHYNRGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ERWCT (D-galactonate dehydratase OS=Erwinia carotovora subsp. atroseptica GN=dgoD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.904e-13
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIAAMAEAYDVALA HCPLGPIALA+CL ++     + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECFKIAAMAEAYDVALAPHCPLGPIALASCLHLDFVARNAVLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ESCF3 (D-galactonate dehydratase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dgoD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.017e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIA MAEAYDV LA HCPLGPIALA CL I+   + + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ECOUT (D-galactonate dehydratase OS=Escherichia coli (strain UTI89 / UPEC) GN=dgoD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.017e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIA MAEAYDV LA HCPLGPIALA CL I+   + + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ECOSE (D-galactonate dehydratase OS=Escherichia coli (strain SE11) GN=dgoD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.017e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIA MAEAYDV LA HCPLGPIALA CL I+   + + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ECOLU (D-galactonate dehydratase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dgoD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.017e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIA MAEAYDV LA HCPLGPIALA CL I+   + + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAEL 323          
BLAST of EY686943 vs. ExPASy Swiss-Prot
Match: DGOD_ECOLI (D-galactonate dehydratase OS=Escherichia coli (strain K12) GN=dgoD PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.017e-13
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  109 PDPSHPGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQIEGGWWGSWIHQRSLGMR*KRTNEM 309
            PD SH GGITE  KIA MAEAYDV LA HCPLGPIALA CL I+   + + + ++S+G+   +  E+
Sbjct:  257 PDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAEL 323          
The following BLAST results are available for this feature:
BLAST of EY686943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
DGOD_RALPJ1.258e-1458.21D-galactonate dehydratase OS=Ralstonia pickettii (... [more]
DGOD_RALSO2.803e-1464.41D-galactonate dehydratase OS=Ralstonia solanacearu... [more]
DGOD_VEREI4.781e-1455.22D-galactonate dehydratase OS=Verminephrobacter eis... [more]
DGOD_VARPS1.065e-1356.72D-galactonate dehydratase OS=Variovorax paradoxus ... [more]
DGOD_ERWCT6.904e-1356.72D-galactonate dehydratase OS=Erwinia carotovora su... [more]
DGOD_ESCF39.017e-1355.22D-galactonate dehydratase OS=Escherichia fergusoni... [more]
DGOD_ECOUT9.017e-1355.22D-galactonate dehydratase OS=Escherichia coli (str... [more]
DGOD_ECOSE9.017e-1355.22D-galactonate dehydratase OS=Escherichia coli (str... [more]
DGOD_ECOLU9.017e-1355.22D-galactonate dehydratase OS=Escherichia coli O17:... [more]
DGOD_ECOLI9.017e-1355.22D-galactonate dehydratase OS=Escherichia coli (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-A11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686943 ID=EY686943; Name=EY686943; organism=Citrus sinensis; type=EST; length=1179bp
AATAAAAAAGAAGAAGAACAATAAAGGCCGGGCGCGACGNNGNNNGCGGG
GNNCCNNCAATGGTACCCTGCAGTACCGGTCCGGAATCCCTCCCAAAAGC
GGTGCCANCCGGATCCGTCTCACCCCGGCGGCATCACCGAGACGCGCAAG
ATCGCCGCCATGGCCGAGGCCTACGACGTGGCGCTGGCGCTGCACTGCCC
GCTGGGCCCGATCGCGCTGGCCACCTGCCTGCAGATCGAGGGCGGGTGGT
GGGGGAGCTGGATCCACCAGCGCAGCCTGGGAATGCGATAAAAGCGAACG
AATGAAATGGCGGAAGGGCGACAAATACGGCGCAGGCGAGGGCGGGGGAG
AAAGGCGCGGGCACGCCCACCATAAAGCCACAGCACTTAAAGGGCGGGAG
GAGGAGAGGAGCGAAGAGGAAGAGAAGGCGCGTGAAGATGGAGGCCCACC
GGCCGACGGCGGGAGAGGGCCCCCGCCGGAGGGCGGGGGCTCATCCCACA
CGCCCCCGCAGACATAAGAGAGGCGCGGACGCCGGGGGGGAGAGCGGCAC
CCGCGACGTAAATTCAGGAGACACAATAAAAAGCGGCGGGCGGGGCGGCG
GGAGGGCGCGGGCACGCCAGCGCCGACTCATGGGAGGGGGAGGAGCACCG
CTGCGCCCCCGACCGCCCCACATCCGGCGCACGGCAAAGAGGAGGAGCGG
AAGGAGAACGGGGGGGAGAGGGCGCGTCGGAGGAACGCCGCCACCCCCGC
ACCGCCCACCCCCCGCGGCGGACCGCGCGCCACGCGCCCCGGACCGCGAG
CGAGACGGCGACACCCGACACCACGGAAACAGGAAGGAAAGAACAAAGAC
CCGCACCGCCCGCACACGTATCAGAAAGGGGGCCGCACCCCACCCACGCA
CCGCGGGCGGGGAAGACAGCGCGAAGCGCAGCCGCGCCACCGAATGAAAT
CGCCACGCCATCCCCCGCCCGGACCACGCCATCACGGCGGGCGGCCGAGG
GAGGGCGGGACCGCGGGCCGCCCCCCCTAGCTCGGCCGGCGGGCGGGTGA
CACGGTAGACCGCGGGGCGGGCGGTGGGGTCCGCCTGGGCCCCCCCCGCG
CCCGCGCGCCCNCCCGGTGGGGGCGGGACGAGGCAGCTACACCACATACA
TCGCAGTGACCCCGGAACCGAGGCGGACG
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