EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2)

HSP 1 Score: 332.798 bits (852), Expect = 2.384e-91
Identity = 155/198 (78.28%), Postives = 172/198 (86.87%), Query Frame = 2
Query:   95 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            ++  +L Y+SGFGN FSSEAI GALP  QNSPL+CP+GLYAEQISGTSFTSPRKLNQRSWLYR+KPS THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS  DF+DGL+TICGAGSSFLRHG+AIHMY AN  M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEIAV+PQGFRF+  LPDG S
Sbjct:    6 KELEELKYQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSFLRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGFRFSIDLPDGKS 203          

HSP 2 Score: 25.0238 bits (53), Expect = 2.384e-91
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  681 GHPRGYIAESFGAH 722
            G  RGY+AE +GAH
Sbjct:  201 GKSRGYVAEIYGAH 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 8.298e-83
Identity = 144/195 (73.85%), Postives = 161/195 (82.56%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT--TPTQLRWKPVDIPDS--PTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            Y SG GNS SSEA+ G LPRGQNSPLVCP GLYAEQ+SGT FT+PR  N R+WLYRIKPS THEPF PR PAH +L+ +FD++ + T  TPTQLRW+P D+P    P DFIDGLYT+CGAGSSFLRHGYAIHMY ANKSMD CAFCNADGDFL+VPQ+G+L I TECGKL V PGEI V+PQGFRFA  LPDGPS
Sbjct:   24 YLSGLGNSLSSEAVAGTLPRGQNSPLVCPLGLYAEQLSGTPFTAPRARNLRTWLYRIKPSVTHEPFHPRRPAHPRLIGDFDRTTTDTVATPTQLRWRPADVPPHHPPLDFIDGLYTVCGAGSSFLRHGYAIHMYAANKSMDGCAFCNADGDFLIVPQQGKLLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPS 218          

HSP 2 Score: 23.0978 bits (48), Expect = 8.298e-83
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  681 GHPRGYIAESFGAH 722
            G  RGY++E FG H
Sbjct:  216 GPSRGYVSEIFGTH 229          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURCH (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 8.030e-59
Identity = 111/191 (58.12%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P   A  +LVSEF  S     T P QLRW P+ +P  PTDF+DGL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFA +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDG 202          

HSP 2 Score: 23.8682 bits (50), Expect = 8.030e-59
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G+ RGYI E+FGA
Sbjct:  202 GNARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURCA (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 8.030e-59
Identity = 111/191 (58.12%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P   A  +LVSEF  S     T P QLRW P+ +P  PTDF+DGL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFA +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDG 202          

HSP 2 Score: 23.8682 bits (50), Expect = 8.030e-59
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G+ RGYI E+FGA
Sbjct:  202 GNARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURCJ (Homogentisate 1,2-dioxygenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hmgA PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.365e-58
Identity = 111/191 (58.12%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P   A  +LVSEF  S     T P QLRW P+ +P  PTDF+DGL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFA +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDG 202          

HSP 2 Score: 23.0978 bits (48), Expect = 1.365e-58
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  202 GDARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURS3 (Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.320e-58
Identity = 109/195 (55.90%), Postives = 145/195 (74.36%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            ++  Y+SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P      +LVSEF  S     T P QLRW P+ +P  PTDF+DGL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G++EV P EIAV+P+G RF+ +LPDG
Sbjct:    9 ANAGYQSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGPQ-RLVSEFGDSADVPPTPPDQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRVEVEPFEIAVIPRGVRFSVTLPDG 202          

HSP 2 Score: 23.483 bits (49), Expect = 2.320e-58
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  681 GHPRGYIAESFGAHV 725
            G  RGYI E+FGA +
Sbjct:  202 GDARGYICENFGAQL 216          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.142e-58
Identity = 108/191 (56.54%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGFGN F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+R+WLYRI+P+A H PF+P      +LV+EF  S     T P QLRW P+ +P  PTDF++GL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFA +LPDG
Sbjct:   13 YLSGFGNEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRAWLYRIRPAAVHRPFEP-FTGRQRLVAEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPAEIAVIPRGVRFAVALPDG 202          

HSP 2 Score: 23.0978 bits (48), Expect = 5.142e-58
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  202 GDARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURA4 (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.139e-57
Identity = 109/191 (57.07%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P V    +LVSEF  S     T P QLRW P+ +P  PTDF++GL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+ +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEP-VTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDG 202          

HSP 2 Score: 23.0978 bits (48), Expect = 1.139e-57
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  202 GDARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURCC (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain MC0-3) GN=hmgA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.937e-57
Identity = 110/191 (57.59%), Postives = 142/191 (74.35%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P   A  +LVSEF  S     T P QLRW P+ +   PTDF+DGL T+ G GS+   +G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFA +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMLVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDG 202          

HSP 2 Score: 23.0978 bits (48), Expect = 1.937e-57
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  202 GDARGYICENFGA 214          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BURM1 (Homogentisate 1,2-dioxygenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hmgA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.292e-57
Identity = 108/191 (56.54%), Postives = 141/191 (73.82%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF+P   A  +LVS+F  S     T P QLRW P+ +P  PTDF++GL T+ G GS+    G AIH+Y AN+SM +  F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF  +LPDG
Sbjct:   13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFAGAQ-RLVSDFADSADVPPTPPNQLRWNPLPMPSEPTDFVEGLVTMAGNGSAAAMSGCAIHLYAANRSMRDRFFYSADGELLIVPQQGRLFIATELGRLDVEPFEIAVIPRGVRFTVALPDG 202          

HSP 2 Score: 23.0978 bits (48), Expect = 3.292e-57
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  202 GDARGYICENFGA 214          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_ARATH2.384e-9178.28Homogentisate 1,2-dioxygenase OS=Arabidopsis thali... [more]
HGD_ORYSJ8.298e-8373.85Homogentisate 1,2-dioxygenase OS=Oryza sativa subs... [more]
HGD_BURCH8.030e-5958.12Homogentisate 1,2-dioxygenase OS=Burkholderia ceno... [more]
HGD_BURCA8.030e-5958.12Homogentisate 1,2-dioxygenase OS=Burkholderia ceno... [more]
HGD_BURCJ1.365e-5858.12Homogentisate 1,2-dioxygenase OS=Burkholderia cepa... [more]
HGD_BURS32.320e-5855.90Homogentisate 1,2-dioxygenase OS=Burkholderia sp. ... [more]
HGD_BURVG5.142e-5856.54Homogentisate 1,2-dioxygenase OS=Burkholderia viet... [more]
HGD_BURA41.139e-5757.07Homogentisate 1,2-dioxygenase OS=Burkholderia ambi... [more]
HGD_BURCC1.937e-5757.59Homogentisate 1,2-dioxygenase OS=Burkholderia ceno... [more]
HGD_BURM13.292e-5756.54Homogentisate 1,2-dioxygenase OS=Burkholderia mult... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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