EY686127

Overview
NameEY686127
Unique NameEY686127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.110e-69
Identity = 128/223 (57.40%), Postives = 167/223 (74.89%), Query Frame = 3
Query:   12 VKQSNLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFPMLLLAKNCGPTN 680
            ++  +L+F A+ YNEMMTLYMSVGQ            +K V PDIFTYNLW+SS AAT +ID+++KIL+EM  D+  ++ WV+Y++L +IYI +S + NAES+  VEAEKSI+QR+WITYDFL+IL+ GLGNK  IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E  EII QWK+S T++FD SAC R+L AF DVGL   A+ F ++L+   C   N
Sbjct:  183 IESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31
Identity = 72/210 (34.29%), Postives = 119/210 (56.67%), Query Frame = 3
Query:    9 RVKQSNLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 638
            ++K+ N++ +++ YN +MTLY   G+             +NV+PD +TYN+W+ + AAT  I  V+++++EM+ D   + DW  Y N+ +IY+ A     AE + L E E   TQR +  Y FLI LY  LG   ++ +IW+SLR+   K ++  Y+ ++   + L  L     +  +W Q+  S +DI   N L+GA++  GL +KANE
Sbjct:  148 KMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKANE 355          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.587e-21
Identity = 60/209 (28.71%), Postives = 100/209 (47.85%), Query Frame = 3
Query:   48 YNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFPMLLLAKNCGP 674
            +NEMM LY + GQ               +  ++ +YNLW+++      +  V+ +  EM  D      W     L N+YI +     A    L +AEK + +   + Y FLI LYA LGNK+ + ++W+  +    +++  NYIC+LSS +  G L+E   +  +W ++   ++D+   N LLGA+   G   KA      +L +   P
Sbjct:  181 FNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARL-VLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 55/217 (25.35%), Postives = 107/217 (49.31%), Query Frame = 3
Query:   24 NLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFPMLLLAKNCGP 674
            N   N+L +N MM++YM + Q            ++ + P   TY++W+ S  +   +D ++KI+DEM  DS     W  + NL  IY T + L     S L   E+ +      ++ FL+ LYAG+    ++ ++W+SL+  + ++ + +Y+ +L +   LG L  + +I  +W+    + +D+   N  +  +    + E+A +     + K+ GP
Sbjct:  202 NFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWA-YDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGP 416          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18
Identity = 53/199 (26.63%), Postives = 95/199 (47.74%), Query Frame = 3
Query:   36 NALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 632
            N+L +N +M +YM +GQ             K++ P   TY++WI S  +   +D V+K+LDEM  +  G   W  + NL  IYI       AE + L   E ++       Y FLI LY G+ N  ++ ++W  L+     + + +Y+ +L +   L  +  V ++  +W +S    +D+   N  + ++    + E+A
Sbjct:  174 NSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEW-ESTCWTYDMRMANVAISSYLKQNMYEEA 370          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 49/198 (24.75%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   12 VKQSNLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 605
            ++    + + L +N MMTLYM++ +            +K++  DI++YN+W+SS  +  S+++++ +  +M  D     +W  +  +  +YI       AE + L + E  IT R  I Y +L+ LY  LGNK ++ ++W   +     + +  Y  ++SS + +G ++   ++ ++W     S +D    N L+ A+
Sbjct:  195 MRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEW-LPVKSSYDPRIPNLLMNAY 390          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 56/214 (26.17%), Postives = 108/214 (50.47%), Query Frame = 3
Query:   36 NALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFPMLLLAKNCGPT 677
            + L YN M+++Y+S GQ            +    PDI TYNLW+++ A+   ++  +K+  +   +   + DWV Y  L N+Y    ++  A  + L E EK ++++  + Y  LI L+A LG+KD ++  WK ++ + +KM    Y+ ++S+ + LG  ++   + D+W +S +   D    N +L  + +        +F   ++ K   P+
Sbjct:  196 SCLPYNHMLSMYISRGQFEKVPVLIKEL-KIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAK-EEKLNPDWVTYSVLTNLYAKTDNVEKARLA-LKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS 405          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.860e-16
Identity = 59/221 (26.70%), Postives = 105/221 (47.51%), Query Frame = 3
Query:    3 F*RVKQSNLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFPMLLLAK 662
            F  +K+       L YN M+ LY+  G+             + V PDIFT N  + + +    ++ ++K L     D G   DW  Y +  N YI A  L       L ++E+ +  Q++   Y+ L+  Y   G K+++ ++W SL        +  YI ++S+ L +  ++EV +I+++W ++  S FDI   + L+  +   G+ EKA E   +L+ K
Sbjct:  162 FQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379          
BLAST of EY686127 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15
Identity = 51/210 (24.29%), Postives = 98/210 (46.67%), Query Frame = 3
Query:    3 F*RVKQSNLSFNALMYNEMMTLYMSVGQXXXXXXXXXXXXRKNVVPDIFTYNLWISSRAATLSIDQVKKILDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 632
            F ++K+     ++L YN +M LY ++GQ             +NV PD ++Y + I++  A   ++++   L +M      + DW  Y      YI       A    L  +E  + ++    Y+ LI LYA LG K ++ ++W   +   ++  +++Y+ +L S + +  L E  E++ +WK S    +D    N ++  +    + EKA
Sbjct:  149 FEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA-VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNC-YDFRVPNTVIRGYIGKSMEEKA 356          
The following BLAST results are available for this feature:
BLAST of EY686127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PP372_ARATH1.110e-6957.40Pentatricopeptide repeat-containing protein At5g09... [more]
PPR86_ARATH3.491e-3134.29Pentatricopeptide repeat-containing protein At1g60... [more]
PP400_ARATH5.587e-2128.71Pentatricopeptide repeat-containing protein At5g27... [more]
PPR4_ARATH1.797e-1925.35Pentatricopeptide repeat-containing protein At1g02... [more]
PP300_ARATH1.521e-1826.63Pentatricopeptide repeat-containing protein At4g01... [more]
PPR3_ARATH4.427e-1824.75Pentatricopeptide repeat-containing protein At1g02... [more]
PP302_ARATH4.427e-1826.17Pentatricopeptide repeat-containing protein At4g02... [more]
PP166_ARATH1.860e-1626.70Pentatricopeptide repeat-containing protein At2g20... [more]
PP334_ARATH2.686e-1524.29Pentatricopeptide repeat-containing protein At4g21... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-034-H07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686127 ID=EY686127; Name=EY686127; organism=Citrus sinensis; type=EST; length=854bp
CTTTTTGAAGAGTAAAGCAGTCAAACCTGTCCTTCAATGCCCTTATGTAT
AATGAGATGATGACTTTGTACATGTCAGTTGGACAAGTGGAAAAGGTAGC
CTTAGTTGTTGAAGAGCTAAAGCGGAAGAACGTTGTGCCAGATATTTTCA
CATATAATCTATGGATTAGTTCACGCGCTGCAACACTCAGCATCGATCAA
GTTAAAAAAATTTTGGATGAAATGAGCTGTGACTCTGGTGGCAGTGATGA
TTGGGTGAAGTACGTCAATCTCGTCAACATATATATAACTGCCAGTCATC
TTGTGAATGCAGAGTCCAGCACTCTGGTGGAAGCAGAGAAGAGTATAACA
CAAAGACAATGGATAACCTATGACTTCCTTATCATTTTGTATGCTGGTTT
GGGAAACAAAGATAAAATTGATCAGATATGGAAATCCTTAAGGATGACTA
AACAAAAGATGACGAGCAGAAACTACATCTGCATTCTTTCATCTTATCTG
ATGCTTGGACATTTGAAAGAAGTGGGAGAAATTATTGATCAATGGAAACA
ATCTGCCACTTCAGACTTTGATATCTCCGCCTGTAATAGGCTTTTGGGTG
CATTTTCAGATGTTGGATTGACTGAAAAGGCCAATGAATTTCCTATGCTT
TTGCTGGCGAAAAACTGTGGCCCTACAAATGCTTCAGGATAGAGTTTATG
GTATATCCCCAAAACAATGCATCCCAAATACCCATTCTTGAGGGTTGGAT
ATTTTGAACAAAAATAGAAGGTTCGCGGCGGGCTGCAAAATTTACGGCCT
GCCTGGATACGGGCAGGGCCCCGACTTTTCCTTCCGGGAAGGAGGGCTTA
TAAA
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