EY685453

Overview
NameEY685453
Unique NameEY685453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.583e-55
Identity = 115/232 (49.57%), Postives = 147/232 (63.36%), Query Frame = 1
Query:    7 LLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            L  + I++I+VG+GPAGELRYPSYP+  G W+FPGIG FQCYDKY+  S KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y + +HA ELTAGYYN   RDGY PIA++++RH AI NFT      S  ++     P K  Q    S          GENAL  YD + +  I+
Sbjct:  170 LKSEVIIDIEVGLGPAGELRYPSYPQNQG-WQFPGIGEFQCYDKYLRESFKAAAAKAGHSEWEL--PDDAGTYNDVPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQ-QVLSGGWRENIEVAGENALSRYDATAYNQII 396          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.771e-54
Identity = 113/232 (48.71%), Postives = 146/232 (62.93%), Query Frame = 1
Query:    7 LLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            L  + I++I+VG+GPAGELRYPSYP+  G W FPGIG FQCYDKY+ +  KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y +++HA ELTAGYYN   RDGY PIA+M++RH  I NFT      S  ++     P +  Q    S          GENAL  YD + +  I+
Sbjct:  170 LKSELIIDIEVGLGPAGELRYPSYPQNQG-WVFPGIGEFQCYDKYLKADFKAAAAKAGHSEWEL--PDDAGTYNDIPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQ-QVLSGGWRENIEVAGENALSRYDATAYNQII 396          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 3.619e-54
Identity = 114/227 (50.22%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   22 IVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            I++I+VG+GPAGELRYPSYP+  G W+FP IG FQCYDKY+ +  KAA   AG PEW    P DAG YN+ PE T FF K NG + +  G+FFL+WYS  LL+HG++IL  A   F    VK+++KV+GIHW Y   +HA ELTAGYYN   RDGY PIA+ML+RH AI NFT      S   +     P +  Q    S          GENALP YD + +  I+
Sbjct:  175 IIDIEVGLGPAGELRYPSYPQSQG-WEFPRIGEFQCYDKYLKADFKAAVARAGHPEWEL--PDDAGKYNDVPESTGFF-KSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQ-QVLSGGWREDIRVAGENALPRYDATAYNQII 396          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.172e-54
Identity = 114/227 (50.22%), Postives = 141/227 (62.11%), Query Frame = 1
Query:   22 IVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            IV+I+VG+GPAGELRYPSYP+  G W FPGIG FQCYDKY+    K AA  AG PEW    P DAG YN+ PE+T FF+K+ G + S  G+FF++WYS  L+ HG++IL  A  IF    V ++ KV+GIHW Y   SHA ELTAGYYN   RDGY PIA+ML++H  I NFT      + +T      P +  Q    S +   G    GENAL TY    +  IL
Sbjct:  177 IVDIEVGLGPAGELRYPSYPQSQG-WVFPGIGEFQCYDKYLKKDFKEAAAKAGHPEWDL--PEDAGEYNDKPEETGFFKKD-GTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQ-EVLSKAWKEGIEVAGENALETYGAKGYNQIL 398          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 8.061e-54
Identity = 113/227 (49.78%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   22 IVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            IV+I+VG+GPAGE+RYPSYP+ +G W FPGIG F CYDKY+ +  KAAA + G PEW    P DAG YN+ PE TQFFR +NG + +  G FFL+WYS  L+ HG+RIL  A  +F    V++++K++GIHW Y   SHA ELTAGYYN   RDGY  IA+ML RH A  NFT      S  ++     P +  Q    S     G     ENALP YD + +  IL
Sbjct:  172 IVDIEVGLGPAGEMRYPSYPQSHG-WSFPGIGEFICYDKYLQADFKAAAAAVGHPEWEF--PNDAGQYNDTPERTQFFR-DNGTYLTEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQ-QVLSAGWREGLNVACENALPRYDPTAYNTIL 393          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.063e-53
Identity = 115/235 (48.94%), Postives = 143/235 (60.85%), Query Frame = 1
Query:    1 KDLL-GDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            KD L    IV+I+VG+GPAGE+RYPSYP+ +G W FPGIG F CYDKY+ +  KAAA + G PEW    P D G YN+ PE TQFFR +NG + S  G FFL+WYS  L+ HG+RIL  A  +F    V++++K++GIHW Y   SHA ELTAGYYN   RDGY  IA+ML RH A  NFT         ++     P +  Q    S     G     ENALP YD + +  IL
Sbjct:  164 KDFLDAGVIVDIEVGLGPAGEMRYPSYPQSHG-WSFPGIGEFICYDKYLQADFKAAAAAVGHPEWEF--PNDVGQYNDTPERTQFFR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQ-QVLSAGWREGLNVACENALPRYDPTAYNTIL 393          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.225e-53
Identity = 112/232 (48.28%), Postives = 144/232 (62.07%), Query Frame = 1
Query:    7 LLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            L  + I++I+VG+GPAGELRYPSYP+  G W FPGIG FQCYDKY+ +  KAAA  AG  EW    P DAG YN+ PE T+FF K NG + +  G+FFL+WYS  LL+HG+ IL  A   F    V +++KV+GIHW Y +++HA ELTAGYYN   RDGY PIA+M++RH A  NFT      S  ++     P +  Q    S          GENAL  YD + +  I+
Sbjct:  170 LKSEVIIDIEVGLGPAGELRYPSYPQNQG-WVFPGIGEFQCYDKYLKAEFKAAAARAGHSEWEL--PDDAGTYNDVPESTEFF-KTNGTYLTEKGKFFLTWYSNQLLNHGDEILDEANKAFLGCKVNLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQ-QVLSGGWRENIEVAGENALSRYDATAYNQII 396          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.824e-53
Identity = 115/234 (49.15%), Postives = 143/234 (61.11%), Query Frame = 1
Query:    1 KDLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            K L   TIV+I+VG+GPAGE+RYPSYP+  G W FPGIG F CYDKY+ +  KAAA  AG PEW    P DAG YN+ PE TQFF K+NG + +  G+FFLSWYS  L+ HG++IL  A  +F    V++++K++GIHW Y   +HA ELTAGYYN   RDGY  IA+ML RH A  NFT      S  +      P +  Q    S     G     ENAL  YD + +  IL
Sbjct:  165 KFLDAGTIVDIEVGLGPAGEMRYPSYPQSQG-WVFPGIGEFICYDKYLEADFKAAAAKAGHPEWEL--PDDAGEYNDTPEKTQFF-KDNGTYLTEKGKFFLSWYSNKLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQ-QVLSAGWREGLHVACENALGRYDATAYNTIL 393          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.891e-51
Identity = 109/227 (48.02%), Postives = 139/227 (61.23%), Query Frame = 1
Query:   22 IVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            +V+I+VG+GPAGE+RYPSYP+  G W FPG+G F CYDKY+ +  KAAAE AG PEW      DAG YN+ PE TQFF  +NG + +  G+FFL+WYS  L+ HG++IL  A  +F    V++++KV+GIHW Y   +HA ELTAGYYN   RDGY  IA ML RH A  NFT      S  ++     P +  Q    S     G     ENAL  YD + +  IL
Sbjct:  172 VVDIEVGLGPAGEMRYPSYPQSQG-WVFPGVGEFICYDKYLQADFKAAAEEAGHPEWDLLD--DAGTYNDTPEKTQFFA-DNGTYQTDKGKFFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQ-QVLSAGWREGLNLACENALNRYDATAYNTIL 393          
BLAST of EY685453 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 201.445 bits (511), Expect = 6.387e-51
Identity = 111/230 (48.26%), Postives = 139/230 (60.43%), Query Frame = 1
Query:   22 IVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAESAGKPEWGSTGPTDAGHYNNWPEDTQFFRKENGGWCSPYGEFFLSWYSQMLLDHGERILSSAKAIFDATGVKISVKVAGIHWHYGSRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTWHRDA*S*STTICPLCP*KASQ---ASGFSNSESTGSTGLGENALPTYDKSTHEAIL 702
            IV+I+VG G AGELRYPSYPE  G W FPGIG FQCYDKYM++  K A + AG  +W   G   AG YN+ P+ T+FFR  NG + +  G+FFL+WYS  L+ HG+++L  A  +F    V I+ KV+GIHW Y   SHA ELTAG+YN   RDGY PIA+MLARH A  NFT      S         P +  Q   +SG+           GENALP YD + +  +L
Sbjct:  176 IVDIEVGCGAAGELRYPSYPETQG-WVFPGIGEFQCYDKYMVADWKEAVKQAGNADWEMPGK-GAGTYNDTPDKTEFFRP-NGTYKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVA----GENALPRYDATAYNQML 398          
The following BLAST results are available for this feature:
BLAST of EY685453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AMYB_MEDSA5.583e-5549.57Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_TRIRP2.771e-5448.71Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_SOYBN3.619e-5450.22Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
AMYB_ARATH6.172e-5450.22Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 ... [more]
AMYB_HORSP8.061e-5449.78Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV... [more]
AMYB_HORVU3.063e-5348.94Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1[more]
AMYB_VIGUN5.225e-5348.28Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_WHEAT6.824e-5349.15Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=... [more]
AMYB_MAIZE4.891e-5148.02Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1[more]
AMYB_IPOBA6.387e-5148.26Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-D09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685453 ID=EY685453; Name=EY685453; organism=Citrus sinensis; type=EST; length=977bp
AAGGACCTTCTTGGTGACACCATTGTGGAAATCCAAGTGGGAATGGGTCC
AGCTGGTGAGCTGCGTTACCCTTCGTATCCAGAGCAGAATGGGACATGGA
AATTCCCAGGAATTGGAGCTTTCCAGTGTTATGATAAGTATATGCTCAGT
AGCTTAAAAGCAGCAGCTGAATCTGCTGGTAAGCCAGAATGGGGCAGCAC
AGGCCCTACTGATGCTGGACATTACAACAACTGGCCAGAAGATACACAGT
TTTTCCGAAAAGAAAATGGTGGTTGGTGTAGCCCTTATGGTGAATTTTTC
CTAAGCTGGTATTCGCAGATGCTCTTAGATCACGGAGAGAGAATTCTCTC
ATCTGCCAAGGCAATTTTCGATGCTACAGGTGTTAAGATCTCGGTTAAGG
TTGCAGGAATCCACTGGCACTATGGGTCTAGGTCCCATGCCCCTGAGCTC
ACAGCTGGATATTACAATACACGATTCCGTGATGGTTACCTCCCTATTGC
CCAGATGCTAGCACGACATGGTGCCATATTCAACTTTACTTGGCATAGAG
ATGCGTGATCATGAAGCACCACAATATGCCCTTTGTGCCCCTGAAAAGCT
AGTCAAGCAAGTGGCTTCAGCAACTCAGAAAGCACTGGTTCCACTGGGCT
GGGGGAAAATGCCTTGCCCACGTATGATAAATCCACTCACGAAGCAATCT
TGCCAGCAACCATCACTTTGGAGTAGAACAACACACTGGGTGGCATTCCC
AAGACTTTGCGGATGAAACGACCGTCTACTCCGGGCCTGTTTGTTTGATT
TTATTTTTGGTGGTTTTTGTTTTGAGGAGTGAAGGAGGGGGACGGAGGCG
CGCTGGTCGGAGGGGGACCGCAACGTGCCACAAAANAAGACACAAACGGC
CGATGAGGCAGGGAAAATACCAAGGCGACAGCAGAACGGGAGCCAGGGCG
GGATGCGCGCGGCGCAGGGTCAGGATC
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