EY685451 | Citrus Genome Database

Overview


Name	EY685451
Unique Name	EY685451
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	961

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.197e-23
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLY+TVLTVMGVS    +C TVGIQGIAWAFGGMIFALVYCTAG+S GHINP +TFGLLL
Sbjct:   72 FLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLL 131

HSP 2 Score: 26.9498 bits (58), Expect = 6.197e-23
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  Y+VM CLGAV  A
Sbjct:  133 RKLSLTRAVYYVVMQCLGAVCGA 155

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.366e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYITVLTVMGV+    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   66 FLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 125

HSP 2 Score: 28.1054 bits (61), Expect = 1.366e-22
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  YMVM CLGA+  A
Sbjct:  127 RKLSLTRALFYMVMQCLGAICGA 149

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.777e-22
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYITVLTVMGVS    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   70 FLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 129

HSP 2 Score: 26.5646 bits (57), Expect = 1.777e-22
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  Y++M CLGA+  A
Sbjct:  131 RKLSLTRAIFYIIMQCLGAICGA 153

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.777e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYIT+LTVMGVS    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   67 FLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 126

HSP 2 Score: 26.9498 bits (58), Expect = 1.777e-22
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  Y+VM CLGA+  A
Sbjct:  128 RKLSLTRAIFYIVMQCLGAICGA 150

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.312e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYIT+LTVMGVS    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   67 FLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 126

HSP 2 Score: 26.5646 bits (57), Expect = 2.312e-22
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  Y++M CLGAV  A
Sbjct:  128 RKLSLTRALFYIIMQCLGAVCGA 150

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.313e-22
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYI++LTVMGVS    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   66 FLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 125

HSP 2 Score: 28.1054 bits (61), Expect = 2.313e-22
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  YMVM CLGA+  A
Sbjct:  127 RKLSLTRALFYMVMQCLGAICGA 149

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.094e-22
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYITVLTVMGV      C++VGIQGIAWAFGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   65 FLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 124

HSP 2 Score: 28.1054 bits (61), Expect = 5.094e-22
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  YM+M CLGA+  A
Sbjct:  126 RKLSLTRAVFYMIMQCLGAICGA 148

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.622e-22
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYIT+LTVMG+      CS+VGIQG+AWAFGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   65 FLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 124

HSP 2 Score: 28.4906 bits (62), Expect = 8.622e-22
Identity = 13/23 (56.52%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  YMVM CLGA+  A
Sbjct:  126 RKLSLTRAVFYMVMQCLGAICGA 148

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.122e-21
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYI++LTVMGV+    +C+TVGIQGIAW+FGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   66 FLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFL 125

HSP 2 Score: 26.9498 bits (58), Expect = 1.122e-21
Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  YM M CLGA+  A
Sbjct:  127 RKLSLTRAVFYMAMQCLGAICGA 149

[Close]

BLAST of EY685451 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.122e-21
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 2

Query:   62 FLYITVLTVMGVSIFYPQCSTVGIQGIAWAFGGMIFALVYCTAGIS*GHINPPLTFGLLL 241
            FLYITVLTVMGV      C++VGIQGIAWAFGGMIFALVYCTAGIS GHINP +TFGL L
Sbjct:   64 FLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 123

HSP 2 Score: 26.9498 bits (58), Expect = 1.122e-21
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  246 RTISLIMADIYMVMHCLGAVSDA 314
            R +SL  A  Y+VM CLGA+  A
Sbjct:  125 RKLSLTRAVFYIVMQCLGAICGA 147

The following BLAST results are available for this feature:

BLAST of EY685451 vs. ExPASy Swiss-Prot

BLAST of EY685451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39


Match Name	E-value	Identity	Description
PIP16_MAIZE	6.197e-23	81.67	Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1	[more]
PIP12_ORYSJ	1.366e-22	80.00	Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j...	[more]
PIP13_MAIZE	1.777e-22	81.67	Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2...	[more]
PIP11_ORYSJ	1.777e-22	80.00	Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G...	[more]
PIP12_MAIZE	2.312e-22	80.00	Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1	[more]
PIP15_MAIZE	2.313e-22	78.33	Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1	[more]
PIP14_ARATH	5.094e-22	80.00	Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ...	[more]
PIP1_SOLLC	8.622e-22	76.67	Probable aquaporin PIP-type pTOM75 OS=Solanum lyco...	[more]
PIP13_ORYSJ	1.122e-21	76.67	Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ...	[more]
PIP13_ARATH	1.122e-21	80.00	Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C2-003-019-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY685451 ID=EY685451; Name=EY685451; organism=Citrus sinensis; type=EST; length=961bp
CCCGGCCCCGAATTCCCGGGTCGACCCCCCGTCCGTGCAGAGCTCATGGA
TACCCCCCTTTTTCCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCT
ATCTTCTACCCCCAGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGC
CTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGGTATCTCAT
GAGGACACATCAACCCACCACTGACCTTCGGTCTACTGCTAACTACGAAC
CATTTCCCTGATCATGGCTGACATCTACATGGTCATGCATTGCCTTGGAG
CTGTCTCTGATGCTCGCGGTGAACACACCACAACACCTATCACAGATCAA
CAATCTCCATACACCCCTACACCCCACCAACAACAACCCATACCCAAACA
CACCACACACAGATATTAATTATTTATTTGTTGTTTTGACAAAATAAACA
CAACACACCAAACCCAACCACAACACTCATCAAATACTCAACCCGAACCC
TCCCCCGACGGTCCCCTGCCCCGCCAAACTACCACGACACAACTGAAAAA
CAAGAGATAAACAACACGACACCAACGCGAACAACACCAATAAACCCACA
CAATACAAAAAACACTCCCCACATAATAAATTAATATGCAAAACAAAAAC
GTGCCCCCTCACACCCAAGACCCCCGACGCGCCCGAAGACCAACCCCATC
AACCCACCGGCAGCACTCCAATCCGCTGGCCAGCGCCAACTTACCCACTA
AACAGTCCCTCCTGCCCGAAATACACCACCTATGTAAAATTAAACTAACA
CTCCTCCCATCAACATGTTTGTTTTTTTTGTTTTTTTTTGTTTTTGACGA
GCACACTACAGTAACGACAAAGGGAGTCACTGCAACCGCACCGACACAGC
TACCCCCGAACGACCACAAACCCGTACGCCACCAAGCCTCTCCCTCTTAC
CCCTCTCCACA