EY685450

Overview
NameEY685450
Unique NameEY685450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 290.041 bits (741), Expect = 1.333e-77
Identity = 146/180 (81.11%), Postives = 158/180 (87.78%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEFMATFLFLYITVLTVMGV+ S +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGA+CGAGVVKGF+    YE  GGGANVVA GYTKGDGLGAEI+GTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   58 AEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGL-YETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 236
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.064e-77
Identity = 145/180 (80.56%), Postives = 158/180 (87.78%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEFMATFLFLYIT+LTVMG+ +S++ CS+VGIQG+AWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYMVMQCLGA+CGAGVVKGF     Y+RLGGGANVV  GYTKGDGLGAEIIGTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   57 AEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGP-YQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 235
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 6.614e-77
Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAV+Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN +AHGYTKG GLGAEIIGTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   56 AEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 234
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 8.638e-77
Identity = 144/180 (80.00%), Postives = 159/180 (88.33%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYIT+LTVMGVSKS++KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGA+CGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   59 AEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGL-YMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 237
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.128e-76
Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN VAHGYTKG GLGAEIIGTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   56 AEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 234
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.128e-76
Identity = 143/180 (79.44%), Postives = 157/180 (87.22%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGA+CGAGVVKGF+  K Y+ LGGGAN VAHGYTKG GLGAEIIGTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   56 AEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 234
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.473e-76
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYITVLTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGA+CGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   62 AEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGL-YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 240
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 2.513e-76
Identity = 142/180 (78.89%), Postives = 156/180 (86.67%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYITVLTVMGV + ++KC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQ LGA+CGAGVVKGFEG + +  L GGAN VA GYTKGDGLGAEI+GTF  VYTVFSATDAKR+A+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   59 AEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 238
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.513e-76
Identity = 144/180 (80.00%), Postives = 158/180 (87.78%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLYIT+LTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGAVCGAGVVKGF+    Y   GGGANVVA GYTKGDGLGAEI+GTF  VYTVFSATDAKRNA+DSH PI+A LP+ FAVF   L T P+T T I
Sbjct:   59 AEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGL-YMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGI 237
[Close]
BLAST of EY685450 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 4.287e-76
Identity = 143/180 (79.44%), Postives = 156/180 (86.67%), Query Frame = 2 
Query:    2 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFGRVYTVFSATDAKRNAKDSHAPIMALLPLAFAVFFKPLDTTPVTRTEI 541
            AEF+ATFLFLY+TVLTVMGVSKS +KC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGLLLARKLSLTRAV+Y+VMQCLGAVCGAGVVK F GS  YE  GGGAN V+ GYTKGDGLGAE++GTF  VYTVFSATDAKR A+DSH P +A LP+ FAVF   L T P+T T I
Sbjct:   64 AEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGI 242
The following BLAST results are available for this feature:
BLAST of EY685450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PIP12_ORYSJ1.333e-7781.11Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP1_SOLLC5.064e-7780.56Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP12_ARATH6.614e-7779.44Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_ORYSJ8.638e-7780.00Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP11_VICFA1.128e-7679.44Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.128e-7679.44Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_MAIZE1.473e-7680.00Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP2_PEA2.513e-7678.89Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP12_MAIZE2.513e-7680.00Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP16_MAIZE4.287e-7679.44Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-D06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685450 ID=EY685450; Name=EY685450; organism=Citrus sinensis; type=EST; length=962bp
TGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTG
TCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAA
GGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCAC
TGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGC
TGCTAGCGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATG
CAGTGCCTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGG
TTCAAAGAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACG
GCTACACCAAGGGTGATGGTCTTGGTGCTGAAATTATTGGAACCTTTGGG
CGTGTTTACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAAAGA
CTCTCATGCCCCTATTATGGCCCTCCTCCCACTCGCATTTGCTGTTTTCT
TCAAACCACTGGACACCACACCCGTCACGAGAACTGAGATTATACAAGCC
TAAGACCCGGCAAACCAACCATCACATCACCGCAGAACCCCCCCAGCTTC
GCCAACCGCACTATCACACGAGCACCTTCACACACACCTCCACTCAGAAC
CCATCAACCCGCCCAAAACACACAACAGCTCTCTCGATCCTACCTCAATA
CCTACAAACCATCAGCGAACCGGACAGATGAGTACAAGACGAGGCACCTC
AATCACGAGCACAAGCCATAGAACCCTACACCACCCGCGAGACCCAACAC
AGACACACCCGCCAAGTCGTAAACGCAACTCCGACACAACCACACCAGAA
AACAATATCAAACATGCCCACTGCGTCGAGGCAACGCCTGCAGAAGAGCC
GACGAGCCAAAAGCAAAAAGCCCATCAGCGTACACGGCTAAGGAGCGACA
CAGCCGCACAGC
back to top