EY685436

Overview
NameEY685436
Unique NameEY685436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.943e-52
Identity = 100/119 (84.03%), Postives = 111/119 (93.28%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            +ESPTNPRQQI DIRKI+EMAHA GAL+LVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE+LAKE+YFLQN+EGSGLAPFDCW+CLRG+ TMALR E   + A++
Sbjct:  223 LESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARK 341          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.856e-30
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            VE+PTNP  Q  DI  IA +   HG LL+VDN+  +PVL RPLELGADIV+HSATK++ GH+D++AG++ VK ERL +E++  QNA G+ L PFD W+ +RG+ T++LR       AQ+
Sbjct:  142 VETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMRGMKTLSLRMRQHQANAQE 260          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METB_HAEIN (Cystathionine gamma-synthase OS=Haemophilus influenzae GN=metB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.055e-30
Identity = 54/118 (45.76%), Postives = 88/118 (74.58%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQ 365
            +E+P+NP  + CD+ +IA++A  H  +L+VDN+ ++PVLSRPL+LGAD+V+HS TK+IAGH+D + G++  KG+ L   + ++QN  G+ L+PFD W+ +RG+ T++LR +   + AQ
Sbjct:  145 IETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGADVVIHSGTKYIAGHNDALVGLIVAKGQELCDRIAYIQNGAGAVLSPFDSWLTIRGMKTLSLRMKRHQENAQ 262          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            +E+P+NP   I DI+ + ++A  +G L  +DN+ M+P L RPL+LG DIV+HSATKF++GHSDV++G+ AVK E L K+LY LQNA G+ L   DCW+ LRG+ T+ +R E    TAQ+
Sbjct:  145 METPSNPTLGITDIKAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTLQVRLEKASQTAQR 263          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 126.331 bits (316), Expect = 2.269e-28
Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAH--AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTA 362
            +ESPTNPR  ICDIR I ++    A  ALL++DN+++SPVL  PL+ G DIV  SATK+++GH D+M GV+A K + +AK ++F  NA G+ +APF+C++ LRG+ TM LR E     A
Sbjct:  145 IESPTNPRISICDIRAIVKITRSKAKDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSDEIAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNA 263          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: CGL_DICDI (Cystathionine gamma-lyase OS=Dictyostelium discoideum GN=cysA PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.471e-27
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGE 344
            +E+PTNP  ++ DI+ +A+  H+ GA L+VDN+ MSP    PL+LGADIVMHS TK+I GHSD + GVLA   + L  +L FLQN+ G+  +PFDC++ LRG+ T+ +R E
Sbjct:  147 IETPTNPLLKVADIKAVADYVHSRGATLVVDNTFMSPYFQNPLDLGADIVMHSVTKYINGHSDCVMGVLATNNDELYAKLKFLQNSIGAVPSPFDCFLALRGLKTLHVRME 257          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.280e-27
Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            E+P+NP  ++ DI++I+ +A AH AL LVDN+  +P L +P+ LGADIV+HSATK++ GHSDV+AG++    + LA E+ FLQN+ G+ L P D W+  RG+ T+ALR E     AQ+
Sbjct:  142 ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQK 259          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.280e-27
Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            E+P+NP  ++ DI++I+ +A AH AL LVDN+  +P L +P+ LGADIV+HSATK++ GHSDV+AG++    + LA E+ FLQN+ G+ L P D W+  RG+ T+ALR E     AQ+
Sbjct:  142 ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQK 259          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = 3
Query:   15 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            E+P+NP  ++ DI++I+ +A AH AL LVDN+  +P L +P+ LGADIV+HSATK++ GHSDV+AG++      LA E+ FLQN+ G+ L P D W+  RG+ T+A R E     AQ+
Sbjct:  142 ETPSNPLLKVLDIKEISSIAKAHNALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSNELAIEIGFLQNSIGAVLGPQDSWLVQRGIKTLAPRMEAHSANAQK 259          
BLAST of EY685436 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 59/120 (49.17%), Postives = 84/120 (70.00%), Query Frame = 3
Query:   12 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNAEGSGLAPFDCWICLRGVNTMALRGENTHDTAQQ 368
            VESP+NPR +I D+ KIAE+A     + + DN+  +P++ RPLELG DIV HSATK++ GHSD++ GV  V   + LA++L +LQNA G+  APFD ++ LRG+ T+A+R E   + A Q
Sbjct:  149 VESPSNPRLKIVDLAKIAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNGHSDIIGGVAVVGDNKTLAEQLKYLQNAIGAIAAPFDSFMVLRGLKTLAIRMERHCENAMQ 268          
The following BLAST results are available for this feature:
BLAST of EY685436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
METC_ARATH2.943e-5284.03Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]
METB_BACSU1.856e-3052.94Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
METB_HAEIN7.055e-3045.76Cystathionine gamma-synthase OS=Haemophilus influe... [more]
METC_BACSU9.214e-3051.26Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]
CBL_SCHPO2.269e-2850.42Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]
CGL_DICDI1.471e-2751.35Cystathionine gamma-lyase OS=Dictyostelium discoid... [more]
METC_LACLM4.280e-2749.15Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA4.280e-2749.15Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLC4.732e-2648.31Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_COXBU1.377e-2549.17Cystathionine beta-lyase OS=Coxiella burnetii GN=m... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685436 ID=EY685436; Name=EY685436; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGTGGAAAGTCCAACCAACCCTCGACAACAAATTTGTGAC
ATTCGTAAAATTGCAGAAATGGCTCATGCACATGGTGCTCTTCTGCTAGT
GGATAACAGCATTATGTCCCCTGTATTATCACGACCTCTGGAACTCGGAG
CAGACATTGTGATGCACTCGGCTACTAAATTTATAGCTGGACATAGTGAT
GTCATGGCAGGTGTGCTTGCTGTAAAAGGAGAAAGGTTGGCAAAAGAGTT
GTATTTTCTGCAAAATGCAGAAGGCTCTGGGTTAGCCCCATTTGATTGTT
GGATTTGTTTGCGAGGTGTCAACACCATGGCTTTACGAGGGGAGAACACC
CACGACACCGCTCAGCAACACCGCTCAATTCCTTGCTTCCAATAAGACAG
AGCCAAGGAGGGGGGGGCGAGAGCACCCTGAACCATGACACACGGAATAC
ACACCAACCGCAGAACCCCGCCGATGCAACACCAACATGTCCTGGCGCAA
CACGGGCGGCCCCCGCCCGCGACCCCCCCAGCACAACCCGGAGAAAAACA
AAACACACCGCAAAAAACACAACCGCCGCACAAAAACCGCACAAGAACAA
AAGACGCAACGACAGCACAGCAGCGAACGCCGACAGCCAGACAGAGCACC
GCACACACGCCACGGGGCGCGGCACCGGCCCGGCAAACCCCCAGGCACCT
ACACCTCCAACCAACACAGCCACCGGAGACCAGACAAGCCGAACCACACA
CCCAGACGCAACAAACACCGAAACCCGCAGGAAACCACGCGCAACGCAGA
CGACGAAGGCGGGCCCAAGGCGCACAACCCACGAGGGGGCACCCCCGACC
GACCCCCCCACAGCACGCCCCCATCCCACCGACTCAAGCGCC
back to top