EY685429

Overview
NameEY685429
Unique NameEY685429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685429 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.498e-65
Identity = 147/237 (62.03%), Postives = 156/237 (65.82%), Query Frame = 1
Query:   31 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAXXXXXXXXXXXNLYHSMRMISKP**VPR*QNKGDVS*WVLS**W**STC-------------GMRLADGQVHVEKKCNQALA 702
            MTRIKEFFTKLSESSTNQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKA             Y + + +S        Q+  D+   + +      TC                L+DGQVHVEK C+ ALA
Sbjct:    1 MTRIKEFFTKLSESSTNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEE-------YPNKKSLS--------QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALA 222          
BLAST of EY685429 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.656e-64
Identity = 145/237 (61.18%), Postives = 155/237 (65.40%), Query Frame = 1
Query:   31 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAXXXXXXXXXXXNLYHSMRMISKP**VPR*QNKGDVS*WVLS**W**STC-------------GMRLADGQVHVEKKCNQALA 702
            MT IKEFFTKLSESS+NQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKA             Y + + +S        Q+  D+   + +      TC                L+DGQVHVEK C+ ALA
Sbjct:    1 MTHIKEFFTKLSESSSNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEE-------YPNKKSLS--------QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALA 222          
BLAST of EY685429 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.346e-38
Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  193 KNSGDNGN-----EPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETLDELHKA 495
            KNS D+ +        HAI+KS+CS+T +P+LC+SAI  V + SKKVTSQKDVIE+SLNIT  AV  NY+ +++L+K R  LT REKVALHDCLET+DETLDELH A
Sbjct:   47 KNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTA 153          

HSP 2 Score: 44.2838 bits (103), Expect = 5.346e-38
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 3
Query:  501 KDLEEYPNKKSLSQHADDLKTLMSAAMT 584
            +DLE YPNKKSL +H +DLKTL+S+A+T
Sbjct:  155 EDLELYPNKKSLKEHVEDLKTLISSAIT 182          

HSP 3 Score: 28.4906 bits (62), Expect = 5.346e-38
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  596 TCLDGFSHDDGNK 634
            TCLDGFSHD+ +K
Sbjct:  186 TCLDGFSHDEADK 198          
BLAST of EY685429 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.843e-34
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1
Query:  226 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLETIDETLDELHKA 495
            HAILKS CSST YP+LCFSA+AA     K++TSQK+VIE SLN+TT AV+HNYF ++KL+ KR  LT RE  ALHDCLETIDETLDELH A
Sbjct:   59 HAILKSVCSSTLYPELCFSAVAAT--GGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVA 147          

HSP 2 Score: 43.1282 bits (100), Expect = 1.843e-34
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 3
Query:  501 KDLEEYPNKKSLSQHADDLKTLMSAAMTK*RGRVLMGSLMMMVIKHVRDAI 653
            +DL +YP +KSL +HADDLKTL+S+A+T  +G  L G       + VR A+
Sbjct:  149 EDLHQYPKQKSLRKHADDLKTLISSAITN-QGTCLDGFSYDDADRKVRKAL 198          
BLAST of EY685429 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.913e-28
Identity = 81/186 (43.55%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  187 SRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLETIDETLDELHKAXXXXXXXXXXXNLYHSMRMISKP**VPR*QNKGDVS*WVLS**W**STC-------------GMRLADGQVHVEKKCNQALA 702
            S+ N     +   HA+L+SSCSSTRYP+LC SA+  V     ++TSQKDVIE S+N+T TAVEHNYF ++KL+ KR  LT REK ALHDCLETIDETLDELH+            +LY + + +         ++ GD+   + S      TC                L  GQ+HVE  C+ ALA
Sbjct:   43 SKANEKRTLSPSSHAVLRSSCSSTRYPELCISAV--VTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHET-------VEDLHLYPTKKTLR--------EHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALA 211          
The following BLAST results are available for this feature:
BLAST of EY685429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PME3_CITSI1.498e-6562.03Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.656e-6461.18Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC5.346e-3861.68Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH1.843e-3470.33Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH1.913e-2843.55Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-019-B05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685429 ID=EY685429; Name=EY685429; organism=Citrus sinensis; type=EST; length=949bp
ATCTTTTGTTCTCTCTTATCCAGAAAAAAAATGACCCGCATAAAAGAATT
CTTCACAAAACTTTCTGAATCTTCTACCAACCAAAACATTTCCAATATTC
CCAAGAAAAAAAAGAAACTATTCTTAGCTCTTTTTGCAACGCTACTCGTT
GTCGCTGCCGTAATCGGCATTGTCGCCGGAGTGAACTCAAGAAAAAACTC
CGGCGACAACGGCAACGAGCCTCATCATGCTATCCTCAAATCATCATGTA
GCAGCACAAGGTACCCGGACTTATGCTTTTCGGCTATTGCTGCCGTTCCA
GAGGCCTCCAAAAAGGTGACAAGCCAAAAGGACGTTATTGAGATGTCCTT
AAACATCACAACAACAGCCGTGGAACACAACTACTTCGGGATTCAGAAGC
TCTTGAAGAGAACGAATCTCACCAAACGGGAAAAGGTTGCTCTCCATGAC
TGTCTTGAGACGATCGATGAGACTCTTGATGAGTTACACAAAGCCCGTCG
AAGGATCTTGAGGAGTACCCGAACAAGAAATCTTTATCACAGCATGCGGA
TGATCTCAAAACCCTAATGAGTGCCGCGATGACAAAATAAAGGGGACGTG
TCTTGATGGGTTCTCTCATGATGATGGTAATAAAGCACGTGCGGGATGCG
ATTGGCAGACGGCCAGGTTCATGTTGAGAAGAAGTGCAACCAGGCCCTTG
CCTATGATCCACAACCTCGACTGACCCAGAGCTGTTATGCTGGAGGACTC
ACCCGAACCGGAAACTGATATAAAGGAGAACAGAAAGGAGAGAAGAGAGG
AAGGAGGGGAGGAAGCCCAACGACACGACGAGCTCAAGCCACACTCTGTC
GCGCACCCCGCACAAACACTGTGGAGAAAGGGAGCGGATCCAACGCACCG
ATCACAGAGAGAAGCTAACACAAATGAGGCACAAGAAGGGCGAAACAAG
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