EY685356

Overview
NameEY685356
Unique NameEY685356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685356_ssr391 microsatellite EY685356_ssr391:391..402. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.482e-69
Identity = 120/185 (64.86%), Postives = 151/185 (81.62%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFS 557
            S A+VMG     ++WHVYSASAE+  +  P+YTLEMCMTGLD+K ASVF+KT  SSAA+MT+ SGIRKILP S+ICDF+F+PCGYSMN++EG  +STIHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE LG  GS++Y  F+
Sbjct:  149 SKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFT 333          

HSP 2 Score: 23.0978 bits (48), Expect = 2.482e-69
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  601 CCWSEDEKGRGK 636
            CCWSE+E   G+
Sbjct:  347 CCWSENEDQEGE 358          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 9.360e-69
Identity = 120/185 (64.86%), Postives = 150/185 (81.08%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFS 557
            S A+VMG     ++WHVYSASAE+  +  P+YTLEMCMTGLD+K ASVF+KT  SSAA+MT+ SGIRKILP SEICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE L   GS++Y  F+
Sbjct:  149 SKAYVMGGAGKQQQWHVYSASAESAENTFPIYTLEMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFT 333          

HSP 2 Score: 23.0978 bits (48), Expect = 9.360e-69
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  601 CCWSEDEKGRGK 636
            CCWSE+E   G+
Sbjct:  347 CCWSENEDEEGE 358          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.511e-67
Identity = 126/186 (67.74%), Postives = 150/186 (80.65%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR 560
            S A +MGSPD T++WHVYSASA +    +PVYTLEMCMTGLDR++ASVFYKT ESSAA MT  SGIRKILPKSEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVLACF+PAEFSVALH+D+          +D+KGYS  E   EE G  GS++Y  F+R
Sbjct:  151 SKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTR 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.279e-66
Identity = 123/186 (66.13%), Postives = 147/186 (79.03%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR 560
            S A +MG+PD T++WHVYSASA      +PVYTLEMCMTGLDR++ASVFYKT  SSAA MT  SGIRKILP SEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F++
Sbjct:  151 SKAVIMGNPDKTQKWHVYSASAGPVQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTK 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.181e-66
Identity = 124/186 (66.67%), Postives = 145/186 (77.96%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR 560
            S A +MGSPD  ++WHVYSASA      +PVYTLEMCMTGLDR++ASVFYKT  SSAA MT  SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+R
Sbjct:  151 SKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTR 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.181e-66
Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR 560
            S A +MG+PD T++WHVYSASA      +PVYTLEMCM GLDR++ASVFYKT ESSAA MT  SGIRKILPK EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD +  +L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+R
Sbjct:  149 SKAVIMGNPDKTQKWHVYSASAGTVQCNDPVYTLEMCMAGLDREKASVFYKTEESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTR 334          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.181e-66
Identity = 124/186 (66.67%), Postives = 145/186 (77.96%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSR 560
            S A +MGSPD  ++WHVYSASA      +PVYTLEMCMTGLDR++ASVFYKT  SSAA MT  SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+R
Sbjct:  151 SKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTR 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.414e-65
Identity = 123/188 (65.43%), Postives = 143/188 (76.06%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD 566
            S AF+MG+PD  ++WHVYSAS  +    +P YTLEMCMTGLDR++ASVFYK+  SSAA+MT  SGIRKILP SEICDFEFDPCGYSMNSIE  A+STIHVTPEDGFSYASFEA GYD +   L  ++ERVLACF+P+EFSVA+H D+          L+LK YS  EKI EELG  GS+IY  F R D
Sbjct:  149 SNAFIMGNPDQPQKWHVYSASVGSEQSSDPTYTLEMCMTGLDREKASVFYKSESSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRID 336          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.563e-64
Identity = 126/204 (61.76%), Postives = 160/204 (78.43%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVN---PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALH--SDIVGDEHGDTFMLDLKGYSCGEKIYEEL-GNNGSLIYYSFSRADCSTIS*RQSL 596
            S A+VMG  +  ++WHVYSASAE+ + V    PVYTLEM MTGL ++ ASVF+K+  SSAA+MTEDSGIRKILP+S+ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVLACF+P+EFSVALH   ++V D + +   +++KGY+  E  +E L G  GS++YY F+R   S  S R +L
Sbjct:  146 SNAYVMGGAEKDQKWHVYSASAESANLVTQTAPVYTLEMSMTGLSKRNASVFFKSESSSAAVMTEDSGIRKILPESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVALHGNENVVKDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARGGSSCGSPRSTL 349          
BLAST of EY685356 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.323e-63
Identity = 118/201 (58.71%), Postives = 153/201 (76.12%), Query Frame = 3
Query:    3 STAFVMGSPDNTKRWHVYSASAEAGSHVNP-VYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRADCSTIS*RQSLK 599
            S A++MG+ D TK+WHVY+ASA+  S+ N  VYTLEMCMTGLDR++A+VFYK        MT++SGIRKILPKSEICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF  + L+ L+ RVL+CF+P +FSVA+HS +  + +     +DL+ Y C E+ +E LG  +G+++Y +F +      S R +LK
Sbjct:  147 SVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCGSPRSTLK 347          
The following BLAST results are available for this feature:
BLAST of EY685356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM_IPONI2.482e-6964.86S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA9.360e-6964.86S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_SOLTU1.511e-6767.74S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_DATST1.279e-6666.13S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_TOBAC2.181e-6666.67S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLCI2.181e-6666.67S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_NICSY2.181e-6666.67S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_CATRO1.414e-6565.43S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_HELAN1.563e-6461.76S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM1_ARATH1.323e-6358.71S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-018-B07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685356 ID=EY685356; Name=EY685356; organism=Citrus sinensis; type=EST; length=911bp
ACAGCACAGCTTTTGTCATGGGTAGTCCTGACAACACAAAGAGATGGCAT
GTTTACTCTGCCTCTGCTGAAGCAGGAAGCCATGTAAACCCAGTTTACAC
TCTAGAGATGTGCATGACTGGTTTGGACAGAAAGAGGGCATCTGTCTTCT
ACAAAACTAATGAAAGCTCAGCCGCTATGATGACCGAGGACTCTGGCATC
AGAAAGATTCTTCCAAAATCTGAGATTTGTGATTTTGAGTTTGACCCTTG
TGGTTACTCCATGAATAGTATTGAAGGGGATGCAGTATCTACTATCCACG
TCACACCTGAAGATGGTTTCAGTTATGCAAGTTTTGAGGCTGTGGGTTAT
GATTTTGAGGTTGTGAAGTTGACTCCCTTGCTTGAGAGGGTGCTTGCTTG
CTTCAAACCCGCTGAGTTTTCTGTTGCTCTGCATTCTGACATTGTTGGCG
ATGAACATGGAGACACCTTCATGCTGGACTTGAAGGGATATTCCTGTGGA
GAAAAGATATATGAAGAGCTCGGTAATAATGGTTCGCTGATCTACTACAG
CTTTTCAAGGGCTGATTGCTCCACAATCTCCTAAAGACAATCATTGAAAT
TGCTGTTGGAGCGAGGACGAGAAAGGACGAGGAAAGTAAGGGGAAATAGT
GCCCCGGATATAATATCGGGTTTTGTTTTTTCCATTTAATCCCTTCGCTT
ATAAAAATAAAATGGGGGGGGGGGTAATTTATGGTTGGCGCTTGAGCAAA
CCTTAACTTTTCCCAATAGCAGGATTATACCATGAGGGGGTGCGAACGAG
GAACGCATTTGAATAGCCGCCATACGACAAGGTGCGGAGATGATAAAACG
TGGACAAGCGACACAGCTGGCATACGCACGGGTGAGGCCGCGCGCCAGCC
ACGGACGGTGC
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