EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:145..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 2.143e-90
Identity = 178/292 (60.96%), Postives = 212/292 (72.60%), Query Frame = 1
Query:    7 VRTPHEDEH--QTPTSLNPILPSCA-PQDFHGVASFLGKRSM--SFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSD-IKLDISRTPAIDSPMST--HP-----TSRNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMPGTKDQESLNNMFCGMEDPSGFWPWVGTNQFS 843
            ++T +ED+H  Q+P SL P+LPSC+ PQD HG ASFLGKRS       ++ G   NGE+D+SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQLEKDYD LKRQ++ +KA+ + LQ  NQKL AEIM LK+RE TESINLNKETEGSCSNRS+NSSD ++LDIS  P  +    T  HP       R+ FP    ++   T   Q F NSSS           Q+M   K++ S++NMFC M+D SGFWPW+   Q++
Sbjct:   16 IQTSYEDDHPHQSP-SLAPLLPSCSLPQDLHGFASFLGKRSPMEGCCDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPPSPATATTTTTTMQFFQNSSSG----------QSM--VKEENSISNMFCAMDDHSGFWPWLDQQQYN 294          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 3.004e-76
Identity = 169/298 (56.71%), Postives = 197/298 (66.11%), Query Frame = 1
Query:   40 PTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSRE-VTESINLNKETEGSCSNRSENSSDIKLDISRTPAID-SPMSTHPTSRN--------------LFPTKSTSSVRPTVAA-----QLFHNSS--SSRPDLQCQKIEQNMPGTK-DQESLNNMFCGMEDPSGFWPWVGTNQF 840
            P   NP LPS A     Q+F G+A  LGKR MS+  G   G+E NG  ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD LKRQ +AVKA+ +AL   N+KL AEI+ALK RE  +E INLNKETE SCSNRSENSS+I LDISRTP  D + + T PT+ +              + P   TS  RP         QL H+SS  +  P ++      N+     D  S  N+ CG+++P  FWPW     F
Sbjct:   69 PHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNKETEASCSNRSENSSEINLDISRTPPPDAAALDTAPTAHHHHHGGGGGGGGGGGMIPF-YTSIARPASGGGVDIDQLLHSSSGGAGGPKMEHHGGGGNVQAASVDTASFGNLLCGVDEPPPFWPWPDHQHF 365          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 1.142e-75
Identity = 168/298 (56.38%), Postives = 196/298 (65.77%), Query Frame = 1
Query:   40 PTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSRE-VTESINLNKETEGSCSNRSENSSDIKLDISRTPAID-SPMSTHPTSRN--------------LFPTKSTSSVRPTVAA-----QLFHNSS--SSRPDLQCQKIEQNMPGTK-DQESLNNMFCGMEDPSGFWPWVGTNQF 840
            P   NP LPS A     Q+F G+A  LGKR MS+  G   G+E NG  ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD LKRQ +AVKA+ +AL   N+KL AEI+ALK RE  +E INLNKETE SCSNRSENSS+I LDISRTP  D + +   PT+ +              + P   TS  RP         QL H+SS  +  P ++      N+     D  S  N+ CG+++P  FWPW     F
Sbjct:   63 PHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNKETEASCSNRSENSSEINLDISRTPPPDAAALDAAPTAHHHHHGGGGGGGGGGGMIPF-YTSIARPASGGGVDIDQLLHSSSGGAGGPKMEHHGGGGNVQAASVDTASFGNLLCGVDEPPPFWPWPDHQHF 359          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.910e-71
Identity = 156/282 (55.32%), Postives = 189/282 (67.02%), Query Frame = 1
Query:   19 HEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRS-----MSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSEN-SSDIKLDISRTPAIDSPMST-HPTSRNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMPGTKDQESLNNMFCGMEDPSGFWPWVGTNQFS 843
            H++E   P  L         QDFHG   FLGKRS       F  +D     NG++++SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK++LARALGLQPRQ+AIWFQNRRAR KTKQLEKDYD+LKRQ+E+++ + E LQ QNQKL A++MALKSRE  ESINLNKETEGSCS+RSEN S DI     R P IDS  +  HP      PT        T   Q F NSSS          EQ M   K++ S++NMFCG++D SGFWPW+   Q++
Sbjct:   21 HQEEEDHPQLL---------QDFHG---FLGKRSPMNNVQGFCNLDM----NGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDRSENISGDI-----RPPEIDSQFALGHP------PT--------TTTMQFFQNSSS----------EQRM--VKEENSISNMFCGIDDQSGFWPWLDQQQYN 255          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.890e-56
Identity = 132/280 (47.14%), Postives = 176/280 (62.86%), Query Frame = 1
Query:   19 HEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN-GEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNR--SENSSDIKLDISRTPAIDSPMSTH-PTSRNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMPGTKDQESLNNMFCGMED--PSGFWPWVGTN 834
            HED  Q        LPSC P  F+G  +++  RSMS   +         E++ SDDG+    GEKK+RL +EQVK LEK+FELGNKLEPERK+QLA+ALG+QPRQ+AIWFQNRRARWKT+QLE+DYD LK+Q+E++K+D  +L A N+KL AE+MALK++E  E   + +E E S SN   +ENSSDI L++ R       ++TH  T ++LFP    SS+R           SS+  D   Q  E        +ESL NMF G+++  P+G+W W   N
Sbjct:   29 HEDNSQDQ------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNEGNIVKREAEASWSNNGSTENSSDINLEMPR-----ETITTHVNTIKDLFP----SSIR-----------SSAHDDDHHQNHE-----IVQEESLCNMFNGIDETTPAGYWAWSDPN 277          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4)

HSP 1 Score: 198.749 bits (504), Expect = 3.698e-50
Identity = 120/297 (40.40%), Postives = 168/297 (56.57%), Query Frame = 1
Query:   19 HEDE-HQTPTSLNPILPSCAPQDFHGVA-SFLGKRSMSFSGI-----------------DAGEEANGEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKE-TEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMPGTKDQESLNNMFCGMED--PSGFWPWVGTNQ 837
            HED  H  P+  +  LPSC P  F+G   +++  RSMSF+G+                 +  ++   ED+ SDDGS    GEKK+RLN+EQV+ LEK+FELGNKLEPERKMQLA+ALGLQPRQ+AIWFQNRRARWKTKQLE+DYD LK+Q++ +K+D ++L A N+KLHAE++ALK  +  ES  + +E  E S SN     ++   + S    +          ++LFP+   S+   T +  + H     +    C                 NMF G+++   + +W W    Q
Sbjct:   35 HEDNAHHLPSPTS--LPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNNSSDANHVS-------MIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFC-----------------NMFNGIDETTSASYWAWPDQQQ 305          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.089e-49
Identity = 118/221 (53.39%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   40 PTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-----GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK--------------SREVTESINLN-KETEGSCSNRSENSSDIKLDISR--TPAIDSPMSTHPTSRNL 636
            P SL+P LP  A  D      +        SG D G      +D  D      G   GEKKRRL++EQV+TLE++FE GNKLEPERK QLARALGLQPRQVAIWFQNRRARWKTKQLEKD+D L+RQ +A +A+ +AL + N KLHAEI+ALK                  +E INLN KETE SCSNRSENSS+I LDISR   P    P +  P +R +
Sbjct:   52 PPSLSPFLPDLA-MDAPPPPMY------EASGGDGGGGGAASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKETEASCSNRSENSSEINLDISRPAPPPPPPPANESPVNRGI 265          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.089e-49
Identity = 118/221 (53.39%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   40 PTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-----GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK--------------SREVTESINLN-KETEGSCSNRSENSSDIKLDISR--TPAIDSPMSTHPTSRNL 636
            P SL+P LP  A  D      +        SG D G      +D  D      G   GEKKRRL++EQV+TLE++FE GNKLEPERK QLARALGLQPRQVAIWFQNRRARWKTKQLEKD+D L+RQ +A +A+ +AL + N KLHAEI+ALK                  +E INLN KETE SCSNRSENSS+I LDISR   P    P +  P +R +
Sbjct:   52 PPSLSPFLPDLA-MDAPPPPMY------EASGGDGGGGGAASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKETEASCSNRSENSSEINLDISRPAPPPPPPPANESPVNRGI 265          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.715e-34
Identity = 87/183 (47.54%), Postives = 117/183 (63.93%), Query Frame = 1
Query:  142 AGEEANGEDDFSDDGS------------QAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR---EVTESINLNKETEGSCSNRSENSSDIKLDIS-RTPAIDSPMSTH-PTSRNLF 639
            AG+ +   D   DDGS             A EKKRRL +EQVK LEKNFE+ NKLEPERK++LA+ LGLQPRQVAIWFQNRRARWKTKQLE+DY +LK  ++A+K +R++LQ  N  L  +I  LK++   E  + I  N   +   +N+S  +++  L++S R+P+    + T  PTS   F
Sbjct:   40 AGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAF 222          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.477e-32
Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 1
Query:  133 GIDAGEEANGEDDFSDDGSQAG---EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR----EVTESINLNKETEGSCSNRSE 552
            G+   EE + ++D +  G + G   EKKRRL++EQV+ LE++FE  NKLEPERK +LAR LGLQPRQVA+WFQNRRARWKTKQLE+DY  L++ Y+A++AD +AL+     L AEI  LK +    +   S +  KE E   ++ ++
Sbjct:   17 GVGVEEEMDVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDAD 163          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ATB13_ARATH2.143e-9060.96Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
HOX21_ORYSJ3.004e-7656.71Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX21_ORYSI1.142e-7556.38Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
ATB23_ARATH2.910e-7155.32Homeobox-leucine zipper protein ATHB-23 OS=Arabido... [more]
ATB20_ARATH5.890e-5647.14Homeobox-leucine zipper protein ATHB-20 OS=Arabido... [more]
HAT7_ARATH3.698e-5040.40Homeobox-leucine zipper protein HAT7 OS=Arabidopsi... [more]
HOX23_ORYSJ4.089e-4953.39Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]
HOX23_ORYSI4.089e-4953.39Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]
ATHB5_ARATH3.715e-3447.54Homeobox-leucine zipper protein ATHB-5 OS=Arabidop... [more]
HOX20_ORYSJ3.477e-3249.66Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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