EY685314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_SHIFL (Ribonuclease R OS=Shigella flexneri GN=rnr PE=3 SV=4) HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15 Identity = 39/81 (48.15%), Postives = 58/81 (71.60%), Query Frame = -2 Query: 4 KVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 246 ++G V V++ +RPT R + G IVEV+G + GM +D+ALRT++IP++WP+AV ++ A LK EV E+ K R+DLR LP Sbjct: 187 RMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLP 267
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_ECOLI (Ribonuclease R OS=Escherichia coli (strain K12) GN=rnr PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15 Identity = 39/81 (48.15%), Postives = 58/81 (71.60%), Query Frame = -2 Query: 4 KVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 246 ++G V V++ +RPT R + G IVEV+G + GM +D+ALRT++IP++WP+AV ++ A LK EV E+ K R+DLR LP Sbjct: 187 RMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLP 267
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_THIFE (Ribonuclease R (Fragment) OS=Thiobacillus ferrooxidans GN=rnr PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = -2 Query: 4 GQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 240 GQ V +++ + P R PQG +VE++G APGME+++A+R Y +PH WP+ VL E + V E K R DLR LP Sbjct: 200 GQIVILEITQYPDGRNMPQGHVVEILGEHMAPGMEVEIAVRNYGLPHQWPDEVLAEIKQFSETVPETMKAGRRDLRDLP 278
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_HAEIN (Ribonuclease R OS=Haemophilus influenzae GN=rnr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 4 RNGAGKVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 261 RNGA ++GQ V V++ R + QP G I E++G + A GME+++ALR +DI H +P AV K K EV E+ K+ R+DLR+LP Sbjct: 191 RNGA-RMGQVVVVELQERSASFNQPIGVITEILGDNMAKGMEVEIALRNHDILHKFPSAVEKYVKKFTEEVSEEAKKGRVDLRNLP 275
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_VIBCH (Ribonuclease R OS=Vibrio cholerae GN=rnr PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 4 VRNGAGKVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 264 +R GA ++G V +++ R T G +VEV+G + APGME +A+RT+ IPH WP V ++ A L EV E+ K+ R+DLR LP Sbjct: 189 LRAGA-RMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQQVAGLTEEVPEEAKQGRVDLRALP 274
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_VIBPA (Ribonuclease R OS=Vibrio parahaemolyticus GN=rnr PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = -2 Query: 4 KVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLP 246 ++G V +++ R + G +VEV+G + APGME +A+RT+ IP+ WPEAV K+ L EV E+ K R+DLR LP Sbjct: 194 RMGNVVVIEITDRGSRSRGMMGKVVEVLGENMAPGMETQIAIRTHQIPYEWPEAVEKQIVNLGEEVPEEAKVGRVDLRELP 274
BLAST of EY685314 vs. ExPASy Swiss-Prot
Match: RNR_BUCAP (Ribonuclease R OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rnr PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = -2 Query: 1 FRRYLCRLQVRNGAGKVGQFVGVQVARRPTARFQPQGDIVEVVGTSPAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEVEEKDKEKRIDLRHLPF 291 F+ ++ + N +G V V++ T + + QG IVEV+G + I +ALRT+ IP++W + V + +K ++ EKD + RIDLRHLPF Sbjct: 174 FKIFILDSLISNENISIGTIVVVKLRENATKKSKIQGTIVEVLGKEMGTNLAIKIALRTHCIPYLWSKEVEYQLCGIKSKINEKDFKNRIDLRHLPF 270 The following BLAST results are available for this feature:
BLAST of EY685314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY685314 ID=EY685314; Name=EY685314; organism=Citrus sinensis; type=EST; length=667bpback to top |