EY685269

Overview
NameEY685269
Unique NameEY685269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  325 IFCLTLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546
            IF  TLTGKTITL V+SS++IDNVKAKI+D EGIPPD QRLIF GKQLEDGRTLADYNIQKESTLHLVL LRGG
Sbjct:    3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
The following BLAST results are available for this feature:
BLAST of EY685269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
UBIQ_WHEAT8.624e-2885.14Ubiquitin OS=Triticum aestivum PE=3 SV=1[more]
UBIQ_SOYBN8.624e-2885.14Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1[more]
UBIQ_SOLTU8.624e-2885.14Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1[more]
UBIQ_SOLLC8.624e-2885.14Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=... [more]
UBIQ_PETCR8.624e-2885.14Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3... [more]
UBIQ_PEA8.624e-2885.14Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1[more]
UBIQ_ORYSJ8.624e-2885.14Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ... [more]
UBIQ_NICSY8.624e-2885.14Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE... [more]
UBIQ_MAIZE8.624e-2885.14Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1[more]
UBIQ_LUPPO8.624e-2885.14Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-H02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685269 ID=EY685269; Name=EY685269; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTCATCCAATCCGTCCCTGCAAAGTTGTGGAAATCTCCA
CCTCCAAATACTGGAAGGTCCCGACCTGCTCCTTGCCACTTGTGTAGCAT
TTGATATCTCTCTTGCAGGCAAGATGGAAGATCTTGACGCCTCTTCTCCT
AACTGTAATGATCCCCATGTCGCTCGTACCCACTATCAGGAGAGTGTTCT
TTCTGACGATGGATTTGTGATCTTCCTGAATGACAATGCGAGGACGGGCG
CTCATTGGAGGATCCCAACCTCCGAAACGATGCTACTCTCCCTCTCGGAC
TCCGTCTCCGCGGCGGAATGACTTATCTTCTGTCTGACTCTGACCGGGAA
GACGATCACCCTGTATGTGGACAGCTCCAACTCGATCGACAACGTGAAGG
CGAAGATCCGGGACTATGAAGGGATCCCCCCGGACCATCAGAGGCTCATC
TTCACCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAACAT
CCAGAAGGAATCCACGCTCCACCTTGTGTTGCTCCTGAGGGGAGGAATGC
ACATCTTCGTCAAGACGTTGACCGGGATGACCATCACCCTGGAGGTGGAG
AGCTCCAACCCGATCGACCTCGCGAAGGCCAAGATTCACGAACAAGAGGG
GGATTCCTCCGGACCCCCAGAGGCTCCTCTCTCCCGGCAAGCTAGCTCCG
GGATGGCCTGAATCCCGCCGATTACGGCATTAACAAAGGAATCCACTCTC
CTCCTTGCCCTCCCGGTCCTCGGCCGTGGATGTCAAACAGAATAATTATC
GGACAGGCACCCATCTGACCTCACCAGCCACCAAGATGCCTTCAATTTCA
GTTGCCATGCGGCCTACAGCCTTATTCCATCCTCCCTCC
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